KEGG   Pelagibacterium halotolerans: KKY_3422Help
Entry
KKY_3422          CDS       T01645                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
phl  Pelagibacterium halotolerans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:phl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    KKY_3422
Enzymes [BR:phl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     KKY_3422
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     KKY_3422
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3396113..3396985)
Genome map
AA seq 290 aa AA seqDB search
MKFMPELPEVETVRRGLAPFIEGARIESVRLNRPDLRFPFPQGFVDGLEGQTITHLGRRA
KYLVAALSGGGVWLSHLGMTGAFFVADQRLAEPSRLKPGEAGGKHVHVVADLVHPSRGRV
TLSYSDPRRFGFMDLFAPGTANPFIDPLGPEPLGNDLSAPYLADRLKAKKGPIKTVLLDQ
RVVAGLGNIYVCEALHMSRIDPRRAAGALNEREIERLVAAIRQVLEAAIAAGGSTLKDFS
QADGQPGYFQHSFAVYGHEGDPCPRPECGGVTGRIVQAGRSTFYCPVCQH
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
gtgaaattcatgcctgaattgcccgaagttgaaaccgtgcggcggggcctcgctccattc
atcgagggcgcgcggatcgaaagcgtcaggctcaaccgtcccgacctgcggtttccgttc
ccccaggggttcgtcgacgggctcgaggggcagacgatcacccatctgggacggcgggcc
aaatatctcgtggcggcgctttcggggggcggggtgtggctttcccatcttgggatgacg
ggggcgtttttcgtggccgaccagcggctcgccgaaccgagccgtctcaagcccggcgaa
gccggcggcaagcacgtccatgtggtggccgatctggttcatccctcgcgcgggcgcgtt
actctatcctatagcgatccgcgccggttcgggttcatggaccttttcgcgccgggcacc
gccaatccctttatcgacccgctcggccccgagccgctgggcaacgatctgagcgcgccc
tatctggcggaccggctgaaagcaaagaaggggccgatcaagacggtgctgctcgaccag
cgggtggtcgcggggctgggcaatatctatgtgtgcgaggccctgcatatgagccggatc
gatccgcgacgggccgccggggcgctcaatgagcgcgaaatcgaaaggctggtggcagca
atccggcaggttctggaagcggcgatcgcggcgggcgggtcgacgctcaaggatttttcg
caagccgacgggcagccgggctatttccagcattcctttgccgtctatgggcacgagggc
gatccctgcccgcgtccggaatgcgggggagtgaccggaaggatcgtgcaggcgggacgc
tcgacgttttattgcccggtctgccagcattag

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