KEGG P.horikoshii: PH0123

Pyrococcus horikoshii: PH0123

Entry

PH0123 CDS P.horikoshii

Definition DNA polymerase II small subunit (EC:2.7.7.7)

Orthology K02323 DNA polymerase II small subunit [EC:2.7.7.7]

Pathway pho00230 Purine metabolism
pho00240 Pyrimidine metabolism
pho01100 Metabolic pathways

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:pho00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:pho00240]
Genetic Information Processing; Replication and Repair; DNA
replication proteins

SSDB

Motif Pfam: DNA_pol_E_B tRNA_anti Metallophos

Other DBs NCBI-GI: 14590067
NCBI-GeneID: 1444019
NITE: PH0123
UniProt: O57863

Position complement(107608..109476)

AA seq 622 aa
MDEFVKGLMKNGYLITPSAYYLLVGHFNEGKFSLIELIKFAKSRETFIIDDEIANEFLKS
IGAEVELPQEIKEGYISTGEGSQKVPDHEELEKITNESSVESSISTGETPKTEELQPTLD
ILEEEIGDIEGGESSISTGDEVPEVENNNGGTVVVFDKYGYPFTYVPEEIEEELEEYPKY
EDVTIEINPNLEVVPIEKDYEIKFDVRRVKLKPPKVKSGSGKEGEIIVEAYASLFRSRLR
KLRRILRENPEVSNVIDIKKLKYVKGDEEVTIIGLVNSKKETSKGLIFEVEDQTDRVKVF
LPKDSEDYREALKVLPDAVVAFKGVYSKRGIFFANRFYLPDVPLYRKQKPPLEEKVYAVL
TSDIHVGSKEFCEKAFIKFLEWLNGYVESKEEEEIVSRIRYLIIAGDVVDGIGIYPGQYS
DLIIPDIFDQYEALANLLSNVPKHITIFIGPGNHDAARPAIPQPEFYEEYAKPLYKLKNT
VIISNPAVIRLHGRDFLIAHGRGIEDVVSFVPGLTHHKPGLPMVELLKMRHLAPTFGGKV
PIAPDPEDLLVIEEVPDLVQMGHVHVYDTAVYRGVQLVNSATWQAQTEFQKMVNIVPTPG
LVPIVDVESARVIKVLDFSRWC

NT seq 1869 nt +upstreamnt +downstreamnt
atggatgaattcgtaaagggattaatgaaaaacgggtaccttataactccttctgcctat
tacctcttagttggccatttcaatgagggaaagttctcgctcatagaattgataaaattt
gcaaaatccagggaaacgttcatcatagatgatgagattgctaatgaattccttaagtcc
atcggggctgaagttgaacttccacaggaaataaaggagggttacatttccactggagaa
ggttcacagaaggttccagatcatgaagaactggaaaaaataacgaatgaatctagtgta
gagagttctatttccactggagaaactccaaaaactgaggaactacagcctactttagat
atattagaggaagaaataggggacattgaaggtggagagagttctatttccactggagat
gaagtccccgaagtggaaaataataatggaggtacggtggtagttttcgataaatacggc
tatcccttcacgtatgttccagaggaaattgaggaagaactagaagagtatcctaagtat
gaagatgtaacaattgagatcaatcctaacctcgaagtcgttccgatagaaaaagactat
gagataaaatttgacgttagacgagtaaaacttaagcctccaaaggttaagagcggttcg
ggaaaagagggagagataatagttgaggcttatgcctctcttttcaggagtaggttaagg
aagcttagaaggatcttaagggaaaatcctgaagtgagcaatgttattgatataaagaag
ctgaaatacgtcaagggtgatgaggaggttactataatagggctcgtcaatagtaagaag
gagacctctaaggggctgatatttgaggtcgaggatcaaacggatagagttaaggtgttt
cttccgaaagactctgaagattacagggaagccttgaaagttcttcccgatgctgtagtt
gctttcaagggagtttattcgaaaaggggaatattctttgcaaatagattttatttacct
gatgttccgctatatagaaagcagaagcccccattggaagagaaggtttacgccgttttg
acgagtgatatccacgttggaagcaaggaattttgtgaaaaggcatttattaagttcctg
gagtggcttaatggttacgttgagagcaaggaggaagaagagattgtaagtagaataagg
tatttaattatagcaggggatgttgtcgatggcatcggaatttatcctggccagtattct
gacctaataattcccgatatctttgatcagtatgaggcccttgcgaacctcctctcgaac
gttcccaagcatataacgatcttcataggccccggtaatcatgatgctgcaaggcccgca
ataccgcaacctgagttttacgaggagtacgcgaagcccctgtataagttgaagaatact
gtgataatcagcaacccagcggtcataaggcttcatggtagggattttttgatagcccat
ggaaggggaatagaggatgttgtttcattcgttcctggattgacgcatcataaacctggc
ttacccatggttgagttgcttaaaatgagacatttagctccaacctttggagggaaggtt
ccgatcgctccagatcctgaggatctattggtaatagaggaagttccggatctagttcag
atgggacatgtgcatgtttacgatactgcggtttataggggtgtgcaactcgtgaactcg
gcaacttggcaagcacagactgaattccagaagatggttaacatagtcccaacccccggg
ttggtaccaatagttgatgtcgaaagcgcgagggttattaaagttctcgactttagtagg
tggtgctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   NITE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)

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