KEGG   Pyrococcus horikoshii: PH1544Help
Entry
PH1544            CDS       P.horikoshii                           
Definition DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
Orthology K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Pathway pho00230  Purine metabolism
pho00240  Pyrimidine metabolism
pho01100  Metabolic pathways
pho03020  RNA polymerase
Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:pho00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:pho00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:pho03020]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Pfam: RNA_pol_Rpb1_5 ATP-synt_D Bac_DNA_binding
Motif
Other DBs NCBI-GI: 14591327
NCBI-GeneID: 1443863
NITE: PH1544
UniProt: O93777
Position complement(1372029..1373222) Genome map
AA seq 397 aa AA seqDB search
MVSSSTIKSLIEKKGKDLPESVKQELYEKLIKYNEKYKLTKVEVETIIDEVIKEYEKALI
EPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPMMTV
YLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLINMEFIVEVDPERLEKSGLTMEKI
LKKLQSSFKSAEFEADGYTLIVRPKKIEKISDLRRLSEKVKKHRLKGLSGVGKTIIRKEG
DEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIHEIAEVLGIEAARNAIIEEIINTMHEQGL
EVDIRHIMLVADIMTLDGVVRPIGRHGVVGEKASVLARAAFEITVQHLFEAAERGEVDNL
SGVIENVLIGQPVPVGTGMVKLTMKLPLKPQKEKEEV
NT seq 1194 nt NT seq  +upstreamnt  +downstreamnt
atggtttcttcctctaccattaaatctttgattgaaaagaagggtaaagatcttcctgag
agcgttaagcaggagctatatgaaaagcttatcaagtacaatgaaaagtacaagctcacc
aaggttgaggtggaaactataatagatgaggttattaaggaatatgaaaaggcccttatc
gagcctggagaagccgttggtaccgtagcggctcagtctataggtgagccttcaacccaa
atgacacttaataccttccactatgcaggtgttgctgagataaacgttaccctgggtctc
cctaggatcattgagatagtcgatgcgaggaagaacccttcaacacctatgatgacggtt
taccttgatgaagagcaccgctacgatagggaaaaggccgaggaagtggcgaggagaata
gagggtacaactttggagaatctggcaaggacgactactttagacttaattaacatggaa
tttatagttgaagtagatcctgaaaggcttgaaaaaagcggattgacgatggaaaagatt
cttaaaaagcttcaaagctcatttaagagcgctgagttcgaagccgatgggtacaccttg
atagtcagacctaagaaaattgagaagatttcggatcttagaaggctctccgaaaaggtt
aaaaagcaccgccttaagggtctctcgggcgttgggaagacaatcataaggaaagaaggg
gatgagtacgtcatttatactgagggatcaaactttaagcaagtattaaaggttcctggg
gtcgatcctactagaacgagaaccaataatattcatgagattgcggaagtcctcggaatt
gaagctgcaagaaatgcaataattgaagagattataaacacgatgcacgaacagggtctc
gaggttgatataagacacataatgttggttgctgatataatgacccttgatggagtggta
aggcccataggaaggcatggtgtggtgggtgaaaaggctagcgtacttgcaagggcggcc
ttcgagatcacggttcaacacctatttgaggccgccgagaggggagaagttgacaacctt
agtggtgtcattgaaaacgtgctcatcggtcagcccgttccagtaggaacgggcatggtt
aaactgactatgaagttaccattaaaaccacagaaagagaaagaggaggtgtag
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