KEGG P.horikoshii: PH1545

Pyrococcus horikoshii: PH1545

Entry

PH1545 CDS P.horikoshii

Definition DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)

Orthology K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]

Pathway pho00230 Purine metabolism
pho00240 Pyrimidine metabolism
pho01100 Metabolic pathways
pho03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:pho00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:pho00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:pho03020]

SSDB

Motif Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5
RNA_pol_Rpb1_4 HisKA GFA ART

Other DBs NCBI-GI: 14591328
NCBI-GeneID: 1443864
NITE: PH1545
UniProt: O59227

Position complement(1373234..1375957)

AA seq 907 aa
MHSVKKVIGSIEFGILSPQEIRKMSAVEVTVPDTYDDDGYPIEGGVMDKRMGVIDPGLRC
ETCGAKAGECPGHFGHIELARPVIHVGFAKTIHRILESTCRECGRIKLTDEEIEEYMKKL
ELAKNRRSEVNKILKEIHKKARERMVCPHCGAPQYPIKFEKPTIYWELRKDEQGNEYKHR
MMPTEIRDRLEKIPDKDLPLLGLHPEKSRPEWMVLTVLPVPPVTVRPSITLETGIRAEDD
LTHKLVDIIRINNRLRQNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGVPPAKHKSGRP
LKTLAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPIQIAMELTVPEKVT
EFNIEKLRKMVLNGPDKYPGANYVIDPEGRRIRIMESNKENLAKMIDIGWTVERHLVDGD
IVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPIIGGIQDHISGGYLLTREGAYFTREEVEQMLMFAGVDIKEL
PEPDKYENGKPLWSGKTIFSLLLPDDLTVWYRNKLCDEEEKCEALEKLIEEKLIPDPEEV
RKLAYDGFVYIQNGKLLSGAIDKKAYGREDGIILDLIVREYGVERARQFLDQVTKLTIWV
ITHKGFTTGIDDEDLPEEARDRIREIIREAEERVQRLIEAYKRGELEPLPGKSLEETLES
KIMAVLAEARDNAGSVAEKYLGMNNHAVIMAKTGARGKILNITQMAALLGQQSIRGRRLY
RGFKGRVLSHFKPGDLGARAKGFVVNSYKSGLSPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGVIVQFRYGEDGVDPMKSWGGKTVDVDRVIVRTLIK
MRSNGKK

NT seq 2724 nt +upstreamnt +downstreamnt
atgcactcagttaagaaggttataggtagtattgaatttggaatactttcccctcaagaa
attaggaaaatgagtgccgttgaggttaccgttccagacacctacgatgatgacggttat
ccaattgaaggcggagtaatggataagagaatgggtgtcattgacccaggattaaggtgt
gaaacctgtggagctaaagctggggaatgtcctggtcattttggtcatatcgagcttgca
aggcccgtaattcatgtagggtttgctaagacgattcataggatcctcgagagtacctgt
cgtgagtgcgggaggataaagctcacagacgaggaaatagaagagtacatgaagaaactt
gagctagctaagaataggagaagtgaggtcaacaagatacttaaggagattcataagaag
gctagggagagaatggtatgcccccattgtggtgctccacagtatccaataaagtttgag
aagccaaccatatattgggagctcaggaaggatgagcaggggaatgaatacaagcataga
atgatgcccactgagattagggataggcttgaaaagattccggataaggatcttcctctc
cttggccttcatccagagaagtcaagacctgaatggatggttcttacagttcttccagtt
cctcctgttacagtaagaccttccataacgctagaaactggaatcagggccgaggatgac
cttacgcacaagcttgttgacataataaggataaacaatagattaaggcaaaatatagaa
gccggggctccccaacttatcattgaggacctctgggatcttctccagtatcacgttaca
acgtacataaacaatgaaacctctggagttcctccagctaagcataagagtggtaggcct
ctcaagaccctagctcagaggcttaaaggaaaggaaggaagatttagaggtaaccttagt
ggtaagagagttaacttttcagctagaactgtgataagccctgatccaatgataagtatc
aatgaagttggtgttccaatacaaatagcaatggaactcacggttcctgagaaggttacg
gaattcaacattgaaaagctgagaaagatggttctgaatggtcccgataagtatcctggg
gccaactatgtaatcgatccagagggaagaaggataaggataatggagagcaacaaagaa
aatctagccaagatgatagacattggctggactgttgagagacatttggttgatggagat
atagtgttattcaacagacaaccctcactccacagaatgtccatcatggcccacagagtt
agggtaatgccctacaaaacattcagacttaacctagcggtgtgtccaccttataatgct
gatttcgatggagatgagatgaaccttcacgttccgcagaccgaggaagctcaggccgaa
gctaagatcctaatggaggttcagaaccatataatctccccaaggtacggtgggccgatc
atcggtggtattcaggatcacatctcgggaggttacctgctaactagggagggagcttac
tttaccagggaagaagttgagcaaatgctaatgttcgcaggggttgacataaaagaattg
cctgagcctgacaagtatgagaatggaaagcccttatggagcggtaagacgatattctcg
ctacttcttcctgatgaccttaccgtttggtataggaataagctctgtgatgaagaggag
aaatgtgaggcattagaaaagctaattgaagaaaagctcataccagatccggaagaagtt
agaaagctagcctatgatggcttcgtctacatccaaaacggtaagctactaagtggtgcg
attgataagaaagcttatggaagggaagatggtataatactcgatttgatcgttagagag
tatggagttgagagggctagacagttcctggatcaggttactaagcttacaatatgggtt
attactcacaagggcttcacaactggaatagatgacgaagatcttcctgaggaggctaga
gatagaattagagaaattataagggaagctgaagaaagagttcaaagattaatagaagct
tacaagagaggagaacttgagcccctcccaggaaagtccctagaagaaacattagagagt
aagatcatggccgtcttagctgaagctagagataacgcaggttccgtagctgagaagtat
ctcggtatgaataatcatgcagtaataatggcgaagactggagctagaggtaagatactt
aacataactcagatggcagctttgcttggtcaacagtcgattagagggagaagactttac
agaggtttcaaggggagggttctcagtcactttaagccgggagatttaggggctagagca
aaaggtttcgtcgtaaattcctataagagcggcctaagtccccaggaatacttcttccat
gcaatgggtggtagagagggtctcgtagatactgctgttagaactgctcagagtggttat
atgcagaggagactcatcaatgctctccaggatcttaaggttgactatgatgggacggta
agggatccaacaggagtaatagttcagttccgctatggagaggatggagttgatccaatg
aagagttggggtggaaagaccgttgatgttgatagggttattgtgagaaccttaatcaag
atgagatccaacggaaagaagtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   NITE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)

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