KEGG   Pseudothermotoga hypogea: AJ81_02035
Entry
AJ81_02035        CDS       T04277                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
phy  Pseudothermotoga hypogea
Pathway
phy03030  DNA replication
phy03430  Mismatch repair
phy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AJ81_02035
   03430 Mismatch repair
    AJ81_02035
   03440 Homologous recombination
    AJ81_02035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phy03032]
    AJ81_02035
   03400 DNA repair and recombination proteins [BR:phy03400]
    AJ81_02035
Enzymes [BR:phy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AJ81_02035
DNA replication proteins [BR:phy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AJ81_02035
DNA repair and recombination proteins [BR:phy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AJ81_02035
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 RuvB_N AAA_5 DNA_pol3_gamma3 AAA_14 AAA_assoc_2 AAA_30 TIP49 AAA_19 AAA_18 DNA_pol3_delta Mg_chelatase AAA_28 Rad17 nSTAND3 AAA_16 NACHT ABC_tran B12-binding_2 TsaE T2SSE DUF6845 RNA_helicase SKI Zeta_toxin AAA_lid_4 PIF1 Viral_helicase1 AAA_29
Other DBs
NCBI-ProteinID: AJC73183
UniProt: A0A0X1KPK4
Position
376410..377819
AA seq 469 aa
MEALYRKYRPKSFSQVIDQVQAKLVLQNAILTDRVSHAYIFSGPRGSGKTTLARILAKAL
NCPNRKDFEPCCTCESCISIDKGNHPDVIELDAASNRGIDEIRRIRDAVMFKPMMGMYKV
YIIDEFHMLTREAFNALLKTLEEPPERVVFVLATTNLERVPATIVSRCQLIEFRSFKEND
ILQQLKLVASKENIPAEEEALKIIAKRASGGMRDALTMLEQVSSYALSDRITVETVERAL
GLAPSGAVEEYLHALMNGDATKVGEIVDRMYEEGYDIEQFVQVCLERMEEEIASHPSTET
ISLARDLMNLASEMRFFENKRIACKLLSIDIAARRGTKVQPTQSAKEQAKSIEPIEQKDE
AVKVQSDLSDQIDVSPLLDYLRNQGDMAMYVALVQANITKKDGTVEVSFLPSQRFQYEYL
REKLFELEYLFKTQLKSNVTVELKVDEEREKQLLEKLQKLFPGRIKIEE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggaagcgctctataggaagtacaggcccaagagcttctcccaggtaatagaccaggtt
caagctaagctggttctccagaatgctattttaaccgatcgtgtatcgcacgcgtacata
ttctctggtccgcgcggaagcgggaaaaccacacttgcaaggatactcgccaaggccttg
aactgtccaaacaggaaggattttgaaccctgttgcacgtgtgaaagctgtatctccata
gataagggaaatcaccccgacgttatcgagttggacgcagcatcgaaccggggcatagac
gaaataagaaggattagagatgctgtgatgttcaaacccatgatgggaatgtacaaagtt
tacataatcgacgagtttcacatgctcacgagagaagccttcaacgcgttgctcaaaacg
cttgaagagcctcccgagcgtgtggtcttcgtgctggccacaaccaacttagagagggtt
ccagcaacgatagtatcgcggtgccaactgatagaatttcgaagtttcaaggaaaacgat
atcttacagcagctgaaactcgttgcatccaaagaaaacatacctgccgaggaagaggct
ctcaaaatcatcgccaagcgtgcatcgggtggcatgcgggacgcgctgacgatgcttgaa
caggtttcaagttatgcgctcagcgatagaatcacagtcgaaacggtggagcgagcgctg
ggcttggctccgtcaggagcggtggaagaataccttcacgcgttgatgaacggcgatgcg
acgaaggttggagagatcgtagacagaatgtacgaagaaggttacgacatcgaacagttc
gttcaggtctgcctggaacgaatggaggaagagatcgcttctcatccatccacggagacg
atctctctcgccagggacctgatgaacctggcaagcgagatgaggttcttcgaaaacaaa
cgaatcgcctgcaagctgctttcaatcgacatcgcagccaggagaggaacaaaggtgcag
ccgacgcagtctgcaaaggagcaggcgaaaagcatcgagccaattgaacagaaagacgaa
gctgtaaaggtacaatcagacctttctgaccagatcgatgtcagcccgttactggactat
ctgagaaatcagggcgacatggcgatgtatgtggcactggtgcaggcgaacatcacaaag
aaagatggtacagtagaagtatcgttccttccgtctcaaagatttcaatacgagtatctc
agagaaaaactcttcgagctggagtatctcttcaaaactcagctcaagtctaacgttacc
gttgagctcaaggttgacgaagaacgcgagaaacagttgctcgaaaaacttcagaagttg
ttcccaggtagaatcaagatagaggagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (31)   
   Pfam (31)   
All databases (44)   

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