KEGG T01023: PICST

Scheffersomyces stipitis: PICST_30874

Entry

PICST_30874 CDS T01023

Definition

hypothetical protein

Orthology

K14310

nuclear pore complex protein Nup205

Organism

pic Scheffersomyces stipitis

Pathway

pic03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:pic03013]

SSDB

Motif

Pfam:

DUF3414

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

AA seq 1842 aa
MDSVTSIRSDLLNVLMAPGKSDGSRARLVDQSKPVTFSDGDEYRINKSFAEIAVLLASEF
DLDEVITAELLFHANNLSFQKGTNLADSARIAFYQRSSYILNILIFLVGSGQVSSVVTGE
AEYELFFRNILGSFSRIYTLLSILNDLIDKQRVTSDINSLEFIKAIGHARAQLFEHHELL
GQLLYSLIEAEPRKYADQAHFAEIADLLNKKVSDEDVFVLHFLPAIFSLVTQTLGSDAEA
DKLHRHITSTLATDYRTVADNDVVDVSKSKLKGVDIVVYFFFLSRFVPWCKQSDERTKKY
DYKDDILRYLEWLINYGAMERLLSYTADTAHPHTTQLFEWSNLYDFRSLLQKSCPRLSPV
KFVYPSAQEVIHASHTKPGLDNVSILFDTTVYKVTPAFSENLLAPLFHQFFTCFINNSAL
ILTSLRDTEEDFVLSYINRKQIENDSDIDAVVTRSKTEANGDAPSKNDKSRSDELDLDEI
ASRSDLERFYLAFAYTYNSRPELCSDFWSSDEITNDIVGFLAWGLSNNTSPLITATFSLL
LGSLASSGDEASARIWEILVKNNTSLKKNDYSKISIDSIVDSLNYYIDALIENFEQDLFD
QIKQQQKRQEFLFSSSSSKQDGDDQSNNKIVIELAEDAVVFISGFVQLISSIVRNLSSSN
ERSNEIKNIAFSRFSPIITGFLRFDNLITGSKLVSVDIQPIGANAPKLIDLPSVLVNEDN
RVVLSNLMLSFLADFVHNGDNLATNYKVWRIVDRWIYHGLLDQTNSNGPTPSQLDSTSLR
QPPSKPKYSSKRNLRINQAFQISLSHLSQVSNFTRLLACLLKPLSNENQAFTPYSLLYPV
DLGYGYRSNNLIGIWPYIEYLLLEVLAKTDDLDSNEDRHKLQGVIMEIIYSSLGEVDWKF
LNDLAPNVIKNITNIDDIFDSLVPNIHMTYQLFVKSHHSMAVMNFLFDEKAWKALFSIIN
IGVDAASSSDDLSILIQNTLSTIDKVLELQDTFINRLLPMLKNKDIVPISNTSAPNGFGT
SMSLALSTPRSVSDNFYFPKAVGTHGTSDFYEIFLFNLKTVAHFGLYVGSSNPVLAESAL
SILDRIRLSHYFIAKNSFSSNDPVLNTNRLLTTFESIDESLKIKYAFIDHFESYETNLEL
KYKILHFLLGNLNQATGKEPTVAHFLLGYDIRGGKLFFHDSDNTNTLLKCLLSCLNLSLD
LISEIDYNNGNNNIIDIGPAKLSSLILEILIKLSRDSISSIITLNHLRESDSLFEKLINY
QPRLDMHTIWCGNTFDGDLQEENYNEFVNSALSTQAFFSFINQRNLILQYLSLEFHHIVS
ITKKEFYTQLLLNNKEFLNGTPKFLSFLDVLNYNFNNFEIHNGEGFNRKYNLPLLIEHVH
DEQTHTVDLSVLNKVYKLVCQSSTFTTREQKISFAQEIMVEGNKISEFVTKYLVSNDLRE
IQLKTLHSWCQLVEILITDDTVGSKNFILEVLQVILPKINDYLESDILFSEELISLSVLL
FDLYDQEILAEKNNEDFALGIQRLIPLFKTCIAGILNSNSTPNLRSDLYVLANKFLIKVI
SSEELVRELSVIIKSVDKKFVDLISNDAIYSEGSSRITSILLLESLFHLASLSKNNFILD
LLVKNNSLLLLLRSVTRTDEMLSICSKSGSGVSLDSLLYELTAFRSTLYLLIRVAQSKAG
ALQLIQGEIFSILKQSNLLKIDPDLGLDLSFDEFQDLKNVRVNLLLDTPLSLNDLADIRN
IRNENSISYFEFLIPIFQLIATVLLSMGPSYKPSIIQARDLMAGVNRLVVGIMKRDIILE
TKKVEPSLYKEDQFSLHGLKELVRLFTLLDSLISYEEKNRYV

NT seq 5529 nt +upstreamnt +downstreamnt
atggacctggtcacctccatcagactggatctactcaatgtgcttatggctccaggcaaa
agcgacggatccagggctcggttggtcgaccagctgaagccagtgaccttttctgatggc
gatgagtatcgcatcaacaagctgttcgcggagattgcagtcttgcttgcgtcggagttt
gacttggacgaagtcatcacggccgagttgcttttccacgccaacaacttgagcttccag
aagggtaccaatctcgccgactccgccaggatcgcgttctaccagcgactgctgtacatt
ttaaacatcttgatctttctcgtcgggctgggccaggtgctgtcagttgtaacgggggaa
gctgagtacgagctcttcttccgtaatatcctcgggtcattttcgaggatctatacgctt
ctcagcatccttaacgatctcatcgacaaacagcgagtcactagcgatataaatagcctt
gaatttatcaaggcgataggccacgccagagcacagttgtttgagcaccacgaactcttg
ggccagttgttgtacagcttgatagaagcagaacctcgtaaatacgccgaccaggcgcat
tttgcagaaatagctgatttgctcaataaaaaagtctcagacgaggacgtatttgtgctc
cactttttgcctgccatattcagtcttgtaacgcagactttgggctccgatgccgaagcg
gacaagcttcacagacacatcacgtctacactcgcgaccgactaccggaccgtggcagat
aacgatgtagtggacgtgtccaagtcgaaactcaaaggtgtggatatcgtagtgtatttc
ttcttcttatccaggttcgtcccctggtgcaagcagctggacgaacgtactaaaaaatac
gactacaaggacgacatacttcgctacttggaatggctcatcaactacggggccatggag
agacttttgtcgtacacagcagacacggcacatccgcataccacacaactttttgaatgg
agcaacctctacgactttcggtcacttctccagaagtcgtgtcctcgtcttagcccggtg
aagtttgtgtatccgtcagctcaggaggtaatccacgcatcgcacaccaagccaggattg
gacaacgtctccatacttttcgatactactgtctacaaggtgacaccggccttcagcgag
aacttgttggcgccgcttttccaccagttcttcacgtgcttcatcaacaattctgcgttg
atattgacactgttgcgtgacacagaagaggactttgtgttgtcatacatcaatagaaag
cagatcgagaacgactcggacatcgacgccgtagtaactagaagcaagacagaagccaac
ggagatgcgccatccaagaacgataaatcgaggtctgacgagcttgatctcgacgagata
gcctcacggtcagacttagaacgtttctacttggccttcgcctacacatacaactcgcgg
ccagagctctgttcggacttctggtcatcagacgaaataacgaacgacatcgtaggcttc
ctcgcgtgggggttgagcaacaatacgtctccgctcatcacggctaccttcagcttgttg
ctcggttcgttggcgtctagcggtgacgaagcttctgcccgtatctgggagatcttggtc
aagaacaatacttccttgaagaagaatgactactccaagatttccatagactccatcgtc
gactctttgaactattacattgacgctctcatagaaaacttcgagcaggacttatttgac
cagatcaagcaacagcagaagagacaagagtttctcttttcgagcagctccagcaagcag
gatggagacgaccaaagcaacaataagattgtcatagaattggccgaggatgctgttgtc
ttcatttcaggatttgttcagttgatctcgtccatcgtaagaaatctttcgtcgtcgaat
gagcgttccaacgaaatcaaaaatattgccttctccagattctcgcccatcatcacgggg
tttttgagatttgacaatttgatcacgggctccaagttggtatcagttgatattcagcct
attggagccaatgcacccaagttgatcgatttgccaagcgttttggtcaatgaagacaac
agagtcgttttgtcgaacttgatgttgagcttcttggctgacttcgttcataacggtgac
aatctagctacaaactacaaggtgtggcgaattgttgaccgctggatataccacggctta
ttagaccagacaaacagcaatggcccaactccgtctcaattagatagcacgtcacttaga
cagccgccgtccaaacccaagtattccagcaagcgcaacttgagaatcaatcaggctttc
caaattagcttgagccacctttcccaggtctctaatttcaccagattgttggcatgtcta
ttgaagccgcttagcaacgagaaccaagctttcacgccgtactcgctcttgtaccctgta
gatttgggttatggctatagaagcaacaacttaataggcatttggccgtacatcgaatac
ctcttgttggaggtattggcaaagaccgacgacttggatctgaatgaagacagacataag
ttgcaaggcgtcatcatggagatcatctattcatctttgggagaagtcgattggaagttt
ttgaacgaccttgctcctaatgtcatcaaaaatatcaccaacattgatgacatctttgac
tctttggtgccaaacattcatatgacgtaccagttgtttgtaaagctgcatcattcgatg
gccgtgatgaacttcttgtttgacgagaaggcatggaaagcattattcagtatcatcaat
atcggtgtagatgctgctagttcaagcgatgacttgtcaattttgattcaaaacactttg
tctactattgacaaggttttggaattgcaggacacctttatcaatagattgcttccaatg
ttgaagaacaaggatattgttcctatatctaatactagcgctcccaatgggtttggtacc
agcatgagcttagcacttagcactccgagatcagtgtccgacaacttttatttccccaaa
gctgtaggtacacacggaacgtctgatttctacgagatatttttattcaacttgaagact
gtagcccattttggactttatgttggttcgtccaatccagttcttgcagagtcagctttg
agcatcttggataggattcgcttgtctcactactttattgccaagaatctgttcctgtcc
aatgacccagttttgaacacgaacagattattgacaacttttgaaagtatcgatgaatcg
ctcaagatcaagtatgcgttcattgatcactttgagagttacgaaaccaacttggagttg
aagtataagattctccatttcttgctagggaacttgaatcaagccactggaaaggagcct
acagtggcacatttcctcttgggttatgatatcagaggtggaaagctatttttccacgat
tccgataatacaaatacactcttgaaatgtttgttgagctgcttgaacttgagtttagat
ttgatttcggaaattgactacaacaacggaaacaacaatatcatcgacattggtccggcc
aagctctcgtctttgattttggaaattttgatcaagcttagtagagattcgatttcctct
attattactttgaatcatttaagagaatcagacagtttgtttgaaaagttaatcaactat
caaccccgtcttgatatgcacactatctggtgtggaaacacatttgatggtgatcttcaa
gaggaaaactataatgagtttgtgaatagcgccttgagtacccaggctttcttttcattc
atcaaccaaagaaacttgattttgcagtacttgtcgcttgaatttcatcatatcgtttcc
atcaccaagaaggagttctatacgcaattgctcttgaacaacaaggaatttttgaatggt
actccaaaattcttatctttcttggatgtcttgaactataatttcaacaactttgaaatt
cacaacggcgaaggattcaacagaaagtacaacttgcccttattgattgaacatgtacac
gacgagcaaacccacacagttgatttgtcagtgttgaacaaggtgtacaagctagtatgc
caatcgtcaacgttcacgactagagaacagaagatttcatttgcgcaagaaataatggtg
gaaggaaacaaaataagcgagtttgtcacgaagtatttagtttccaacgacttgagagaa
attcaattgaagacattgcattcgtggtgtcaattggttgagatattgatcactgatgat
acggttggatccaaaaacttcatccttgaggttctacaggtaattttgccaaagattaac
gactacttagagtcagacatcttgttctctgaagagcttatctcgttgagtgtgttgttg
tttgacttgtatgaccaagaaatattggccgagaagaacaacgaggattttgcattggga
atccagagattgatccccttgttcaagacatgcatagctggtatcttgaattctaattca
actccaaacttgagatctgatttgtatgtcttggccaataagtttttgatcaaggtgatc
agcagcgaagagctcgttagagagttgtctgttattatcaaatctgtggacaagaagttt
gtcgatctcatttccaacgacgcaatatattctgaagggtcttcccgaatcacttcgatt
ttgttattggagtcgttattccacttggcgtcgttgtcaaagaacaatttcattctagac
ttgttggtgaagaacaactcgttgttgttgttgcttcgttcagttaccaggaccgatgag
atgttgctgatttgctcaaagagtggatctggtgtaagtttagattcgttgttgtacgag
ttgactgcattccgttccacactctatcttcttatcagagttgcccaatcaaaagctggt
gcattgcagttaatacagggcgaaatcttttccattctcaaacaatccaacttgttgaag
atcgacccagacttgggattggacttgctgtttgacgaattccaagaccttaagaacgtc
agggtcaacttactcttggacacaccgttgtcgttgaatgatttggccgatattaggaac
atcagaaacgagaacagcatctcttactttgagttcttgattccgatattccaattgata
gctaccgtccttttgtcaatgggccccagctataagcctagcatcattcaagccagagat
ttgatggctggcgtgaacagactagttgtaggcataatgaagagagacatcatattggag
actaagaaggttgaacctctgttgtacaaagaggaccagttttcactacatgggttgaag
gagttggtgaggttgtttaccttgttggactcgttgatctcgtacgaagaaaagaacaga
tatgtttag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PIC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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