KEGG   Scheffersomyces stipitis: PICST_36549
Entry
PICST_36549       CDS       T01023                                 
Symbol
RIA1
Name
(RefSeq) Translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PICST_36549 (RIA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pic03009]
    PICST_36549 (RIA1)
Ribosome biogenesis [BR:pic03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    PICST_36549 (RIA1)
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 EFG_IV MMR_HSR1
Other DBs
NCBI-GeneID: 4840118
NCBI-ProteinID: XP_001385385
JGI: 36549
UniProt: A3LWX5
Position
6:247421..250528
AA seq 1035 aa
MRLSEETVNKLQSNASCIRNICILAHVDHGKTSLSDSLLATNGIISQRMAGKVRYLDSRE
DEQLRGITMESSAISLYFKVMRRKKDSDETEIKEHLINLIDSPGHIDFSSEVSTSSRLCD
GAVVLVDVVEGVCSQTVNVLRQCWVDKLKPMLVINKIDRLITEWKMSPLEAYQHISRVIE
QVNSVIGSFFAGDRMEDDMIWRESGAEGEFVEKDDEELYFTPEKNNVVFASAVDGWAFNV
NTFAKIYSAKLGFSHSVLSKTLWGDFYLDMKNKKIIPGSKLKASQGNLKPLFVSLILEQI
WAVYENCVIERNQEKLERIIEKLGAKIGPRELRSKDYKNLLNLIMSQWIPISHAILGTVI
EYLPSPIVAQSQRIEKILDESIYNVVEIETDKTKLVDGNFDKSIRTCDSSDPEHHTLAYV
SKLLSIPNEDLPRVGTSAELTADEIKERGRIARELAKKASEAAAAAQGSNTDEFTIVKKD
PFEWEFEEEDFEEETEEEDLDVQTETLVGFTRIYSGSLSKGQKITVIGPKYDASLPKDSE
SNKEQIAKEVEIKDLYLIMGRELVPMHTVPAGNIVGVVGLDEAVLKNATLCSEILDDKPY
INLASTSTLIHNKPIMKIAVEPTNPSKLTKLERGLDLLSKADPVLEWFFDDDSGELIMCV
AGELHLERCLKDLQERFAKGCEVIVKEPVIPFREGLADDRKNTSNIDENDDEDEKNSLGV
DLDFSVSPMPNKITQFLIDHESEIQTIQNKKLATEEQVGLFKKKFKSVLDEEKFYAEFEN
VEDLVNHLIAFGPKRIGPNIFVESKGNSHKFTHLFGDNDSLSKFEFENNVLNGVQLAFNE
GPLASEPLQGVIITLKRSEQIMDENGEPVRAINQGRIIVHTRNLIHKEFLLKSPRLFLAM
YTCDIQATSEVLGKVYAVVQRTGGSIISEEMKEGTPFFTIEARIPVVEAFGFSEDIRKKT
SGAASPQLVFAGYDMLDIDPYWVPHTEEELEDLGEFAERENVARRYMNTIRRRKGLFVDE
KVVKNAEKQRTMRKD
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgaggctatccgaggagacggtaaacaagctccagctgaatgcttcgtgcattagaaat
atttgtattttggcccatgtggaccacggcaaaacttcattgagtgattctctattagct
accaacggaatcatctcacagagaatggcaggaaaagtcaggtatctagactcaagagag
gatgaacagctcagaggtattactatggaatcctcggcgatctcattgtacttcaaagtt
atgcgcagaaagaaagactcagacgaaactgagatcaaagagcatttaatcaacttgatt
gactcgcccggccatatcgatttctcatccgaagtatctacctcttcgagattatgtgat
ggtgccgttgtattagtcgatgtagtcgagggagtatgttctcagactgttaatgtgctc
agacaatgttgggtagacaagttgaagccaatgttggtgataaataaaatcgatcgtttg
atcacagaatggaagatgtctcctttagaagcatatcagcatatatccagagttattgaa
caggtgaactctgttattggttcattcttcgctggtgacagaatggaagacgatatgatc
tggagagaaagtggggccgaaggagaattcgttgaaaaggatgatgaagagttgtatttc
actccagaaaagaacaacgtagtttttgcatctgctgtggatggctgggcttttaatgta
aatacttttgcaaagatttacctggccaaacttggcttctctcattcagttttgtccaag
accttatggggtgacttttatttggacatgaaaaacaaaaagatcattcctggaagtaaa
ttgaaagcgtctcaaggtaatttgaaacctttatttgtatccttgattcttgaacaaatt
tgggctgtctacgaaaattgcgtcattgaaagaaaccaggaaaagttggaaaggataatt
gagaaattgggtgcaaaaattggcccaagagaattgagatcgaaagattacaagaactta
ttgaacttgatcatgtcacaatggatccctattagtcacgctattctaggcacagtcatt
gagtatttgccaagtccaattgtcgctcaactgcaaagaattgaaaagatcttggacgaa
agtatctacaatgttgttgaaattgagactgacaagacaaaattggttgatggcaacttc
gacaagtcaattcgtacgtgtgattcatcagatccggagcatcatacattggcatacgta
tctaaattgttgtctattccaaatgaggatttgccaagagttggtacttctgctgaatta
actgctgatgagataaaggaaagaggcagaattgccagagaattggctaagaaagcttct
gaggctgctgcagctgctcaaggttctaatactgatgaattcactatcgttaaaaaggat
ccttttgaatgggaatttgaagaagaagactttgaagaagaaacagaagaagaagatctt
gacgttcaaacggaaacattagtcggattcactagaatttattctggttctttgtcgaaa
ggacaaaagattactgtcattggaccaaagtatgatgcatcccttcctaaagattctgaa
tccaacaaagaacaaattgctaaagaagttgaaattaaggatttgtacttaatcatggga
agagaattggtgccaatgcatactgtccccgctggaaatattgtcggggttgttgggctt
gatgaagctgttttaaagaatgccactttgtgttctgaaatactagatgacaagccgtat
atcaacttggcttcgacgtcaacattaattcacaataagccaattatgaagattgcggtt
gaaccaaccaatccttcaaaattgactaagttggaaagggggttggatcttttgtccaaa
gctgatccagttttggaatggttctttgatgatgactctggtgagttgataatgtgtgta
gctggtgaacttcaccttgaaagatgtctcaaagatctacaagaaagattcgccaaaggt
tgtgaagtcattgtcaaagaacctgttattccatttagggaaggcttagctgatgacagg
aagaacacttctaacatcgatgaaaatgacgatgaagatgaaaagaattcacttggtgtt
gatttggatttctcagtctcacctatgccaaacaaaatcacacaattcttgattgaccat
gaatcagaaatacaaactattcaaaataagaagcttgcgaccgaggagcaagtaggctta
ttcaagaagaagttcaaatccgtccttgatgaagagaagttttacgcagaatttgaaaat
gtagaagatctagttaaccacttgatagcatttggtcctaagagaattggtcctaacatt
tttgtcgagtcaaagggtaattctcacaagttcacacacttatttggagacaacgactct
ttgtcaaagtttgaattcgaaaataacgttctcaacggtgttcagcttgcattcaacgaa
gggcccttggcttcagaacctttacagggagtaattatcacattgaagagaagtgaacag
atcatggacgagaatggcgaacctgttagagctatcaatcaaggtagaatcattgtccat
actcgtaacttgattcacaaggaattcttattgaagtctccaagattgttccttgctatg
tacacttgtgatatccaagctacttctgaagtcttaggtaaggtttacgctgttgttcaa
cgtacgggcggttctatcatttctgaggaaatgaaggagggtactccatttttcaccatt
gaggccagaattcctgttgttgaagcctttgggttttcagaagacatacgtaaaaagaca
tccggtgctgctagtcctcagttggttttcgccggttatgacatgttggatatagatccg
tattgggttccacataccgaagaagaacttgaggacctaggcgagtttgctgaaagagaa
aatgtggccaggagatacatgaacactataagaagaaggaagggcttgtttgtagacgaa
aaggttgtcaagaacgctgaaaagcagagaacaatgagaaaggattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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