KEGG   Scheffersomyces stipitis: PICST_77457
Entry
PICST_77457       CDS       T01023                                 
Symbol
CTK1
Name
(RefSeq) kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit
  KO
K00916  CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pic01001]
    PICST_77457 (CTK1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_77457 (CTK1)
Enzymes [BR:pic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     PICST_77457 (CTK1)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     PICST_77457 (CTK1)
Protein kinases [BR:pic01001]
 Serine/threonine kinases: CMGC group
  CDK family
   PICST_77457 (CTK1)
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    CTDK-I complex
     PICST_77457 (CTK1)
  RNA polymerase I system
     PICST_77457 (CTK1)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase Kinase-like ABC1 Seadorna_VP7
Other DBs
NCBI-GeneID: 4838787
NCBI-ProteinID: XP_001384266
JGI: 77457
UniProt: A3LUH2
Position
4:1635932..1638326
AA seq 590 aa
MSDRYRPPPAGPRSSRDFQRKPSFKSRERNRDRDRDRDRDNRERDVYKPGGSQRDRERDM
YRPRNDTYTPKKGPDNHKDVHKDTPNDTHKDEPSLGSKRGPPSGPSSYRKRRELAKEKEK
KIEPFRGIPSGRGPPLGPRGGKKAGATNQQQQQQPKPPKQKPQKLSKSQIYSIYVPGGSR
VYQRTQQVGEGTYGKVYKAKNTKTNEFVALKKLRLESEREGFPITAMREIKLLQSFDHPN
IVGLLEMMVEQNQIYMIFDYMDHDLTGFLSHPDLVLEEGHCKYIFQQLMEGLNYLHKKRV
IHRDIKGSNILLDSTGCLKIADFGLARTMKIVNDGESPDYTNRVITIWYRPPELLLGATD
YGREVDIWGVGCLLIELYTKVAAFQGFDEVGQLCRIFNVMGTPSIVDWPDIQNLPWFEML
KPKVNVASKFKAKYESAMSPDGFDLALNLLRLNPKARFTAEQALQHRYFTEEPFPLPLTF
LKDVEGEWHEFETKKRRRKERKRLQDEAKAKQNKDKQSQGTVDVDASLPVKSVSEVPLDI
PQSSTVNTVDVGTVESNIDSDIEIDAVATDDKISEEAKHPKGQESDGYEP
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtctgacagatacaggcctccaccagctggaccacggtcgagcagagactttcagagg
aagccatcatttaagagcagagagagaaatagggatagggatagagacagggacagagat
aatagagaaagagacgtatacaagccgggaggatcacaaagagacagagaaagagatatg
tatagacctcgcaacgacacgtatacacctaaaaaaggaccagataatcataaggatgtt
cacaaagatactcctaatgatacacataaagatgagccttctttaggatccaaaagggga
cctccttctggacccagtagttatcggaagagaagagaattagcgaaagaaaaggagaaa
aaaattgaaccatttagagggataccttctggtagagggccacctttaggacctcgtgga
ggcaagaaagcaggtgccactaatcaacaacaacaacaacaaccaaagcctcctaagcag
aaacctcaaaagctctccaagtctcagatatattcgatctatgttcctggtggatcgcgt
gtttaccaaagaacacagcaagtaggcgagggaacatacggtaaagtctataaagctaag
aataccaagacaaatgagtttgttgccttgaagaagttgcggttggagtctgaacgagag
ggctttccaattacggccatgagagaaatcaagcttttgcaatcgtttgaccatccgaac
attgtgggcttgttggagatgatggtcgaacagaatcagatctatatgatctttgactac
atggaccatgacttgacaggatttttgtcccatccagatttggttcttgaggagggccat
tgcaagtatatcttccagcagttgatggaagggttaaactatttacataagaagagagtc
attcaccgtgacatcaagggttccaacattttgttggacagtaccggctgtttgaagatt
gctgacttcggcttggccagaacgatgaagattgtgaatgacggtgagagtcccgattac
accaacagagtgatcaccatctggtatagacctcccgagttgcttttgggagccactgac
tatggcagagaggtcgatatctggggtgtggggtgtcttttgattgagctttatacgaag
gtagctgctttccagggctttgatgaagttggtcagctttgccgtattttcaatgtcatg
gggactccttctattgtagactggcccgacattcagaatttgccttggtttgaaatgctc
aaaccaaaagttaacgtcgcttccaaattcaaagccaagtatgaatctgccatgtctcct
gatggttttgatttggcattgaatttgcttcgtttgaaccccaaagccaggttcacagcc
gaacaagctttacagcacaggtattttaccgaagagccgttcccacttccattgactttc
ttgaaagatgtagaaggtgaatggcacgagtttgaaaccaaaaagagaagaaggaaggaa
cgtaagagactccaggacgaggctaaagcaaaacagaataaggacaaacaactgcagggc
accgttgatgtcgatgcatctcttcctgtaaaatctgttctggaagttccactagatatt
cctcaatccagtaccgtcaacactgtagatgttggaacagttgagtccaatattgactca
gatattgagatcgatgcagtagccactgatgataaaatcagtgaagaagctaaacatcca
aaaggccaagaaagtgatggttatgaaccatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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