KEGG   Phytophthora infestans: PITG_00227
Entry
PITG_00227        CDS       T01333                                 
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
Organism
pif  Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:pif00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pif03009]
    PITG_00227
Enzymes [BR:pif01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PITG_00227
Ribosome biogenesis [BR:pif03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    PITG_00227
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-GeneID: 9476901
NCBI-ProteinID: XP_002908851
UniProt: D0MQ96
AA seq 609 aa
MTQPKVNETLLDGQKPFAECEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVR
ARTGSGKTAAFALPLLHKILQHKQDTPASEPAVRALVLVPTKELVEQTRRHMMDLMYYCQ
DTVSLLALGGQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLV
LSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQ
FYLPVKASDKDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPH
NSRQHIIEEFNRGLFDYLIATDDSVDRDEQETKAVGSKRGRADDESYGVSRGVDFRGVQF
VINVDFPKSVRAYTHRIGRTARGGASGTALSLVSKEDAKEERALKRVQAKQQAVLSETND
VIAQPAELAFDLKEIDCFRYRVEDVRRAVTRVAVREAQLADVKKEMLNSDRLAAHFQANP
RDLNMLEHDKVVGSAPVQPHLATIPDYLVPTELQPPAPGRTKKKLNKHNKRQRLADGKRR
TDNDPLHTFVAPDADDKKQTVEDRISYGNSGVGKSTAGRQKWKKQHRKGHFNPKTIAKKK
YKMRMGATH
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgacgcagcccaaggtgaacgagacgctgctggacggacagaagcccttcgcggaatgc
gagttcggtctggatcgccgcctcaccaaggcggtagctaagatgcgctttgtgcatgcc
acattggtgcaggtgcactgcatcccgctggcactgcagggcaaggacttgctggtgcgc
gctcgcacgggttccggtaagacggcggctttcgcattgccgttgctgcacaagattctt
cagcacaagcaggatacacccgccagtgagccggctgtacgcgcactggtgctggtgcct
accaaggagctggtggagcagacccgccgccacatgatggacctcatgtactactgccag
gacacagtgagtctgctggcactaggcggccagagtatgaacgcacagcaggcgctgctg
cgtgacgcgcctgacgtcctggtggccacacctggtcgtcttgtggctcatctggaagct
ggcaacctcacactcaaggactctgtgcagaccgtcgtcattgatgaagccgatctagtg
ctatcattcggatacggcgaagacattcgcactattttcaatgcgctgcccaaggcgtgt
cagacgttctgtatgtctgctacgcttagtcctgaattggagaagctgaagcgctccgtc
ctgcacaacccggcggtcgtcaagctcgaggagggagcaacagacggaaaactccaacag
ttctacttgccagtcaaggcgtcggacaaggacctgctgctgtatgctctactgcgactt
ggcgtcgtgagcggcaaggtcatcttcttcgtcaactcgacagatgcggcctaccgcctg
aagctattctttgagcaattcgtgatcaagagcgcagttctgaatgccaaactaccgcac
aactcccgacagcacattattgaggagttcaaccgaggtctcttcgactacctcatcgct
acggacgacagcgtagaccgcgacgaacaggaaacgaaagctgtgggctctaagcgtgga
cgtgctgacgatgagagctacggtgtatctcgcggtgttgacttccgcggtgtgcagttt
gttattaatgtggacttccccaagagtgtccgtgcgtacacacaccgcatcggacgtact
gcgcgtggtggagcctccggtacagctctgtctctcgtgtccaaggaagatgccaaggag
gagcgtgcgctgaagcgtgtgcaggccaagcagcaggctgtgctctccgagacgaatgat
gttattgctcagcctgctgaactagctttcgatctcaaggaaatcgattgcttccgctac
cgtgtcgaggatgttcgtcgcgcggtcacgcgtgtggctgtgcgtgaggctcaattggct
gatgtcaagaaggagatgctgaactcggatcgtctggcggcacatttccaagcgaatccg
cgtgatctcaacatgctggagcacgacaaggtggtgggctctgcgccagtacagccccat
ttggcgacaatcccggactatcttgtgcctaccgagctgcagccgccggcaccaggacgc
accaagaagaaactgaacaaacacaacaagcgacagcgtctcgctgacggcaagagacgt
acggacaatgacccgctgcacacgttcgtggctcctgatgctgatgacaagaaacagact
gtagaagaccgtatcagctacggcaacagcggcgtgggtaagagtactgctggtcgtcag
aagtggaagaaacagcaccgtaagggccacttcaaccccaagactattgccaagaagaag
tacaagatgcgcatgggtgccactcattaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (88)   
   KEGG ORTHOLOGY (1)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (99)   

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