KEGG   Phytophthora infestans: PITG_03157
Entry
PITG_03157        CDS       T01333                                 
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
  KO
K14807  ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
Organism
pif  Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:pif00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pif03009]
    PITG_03157
Enzymes [BR:pif01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PITG_03157
Ribosome biogenesis [BR:pif03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    PITG_03157
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Astro_VPg
Other DBs
NCBI-GeneID: 9464568
NCBI-ProteinID: XP_002906244
UniProt: D0MZI2
AA seq 564 aa
MPRSTGDEDATARFLAKYGVAKLAEQWNLAPEVCATLTKLNIRSFFPVQAVAIPKILASD
SDRVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFV
QGTPLKCGLAIGQSNFAAEQNALVGATSGNKVIATTDGGRSLVDILVATPGRLVDHLEQT
PGFTLQHLQIMIVDEADRLLNQSYQDWISKVYASVFNGQEVDEDGLTLGVGVTCRRQDSI
NRRRIRTPLTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKLGNAGDSDDE
DEDGDEATGSKKMYSTPTNLDEYWIECDTGSKPLVLLELLSEFAGSLSIVFTASVNSTHR
LARLLQLYSTHPERIREFSSSLSQKQRSSLVADCKAGRVETVVCSDAMARGMDIEDVANV
VNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKLGQMKSMMRMLKKADNNKLKPYALQQE
HMKTLVPRYTEALQQLKDTLEAEKAGKLQATSILRKNKMSVSGGDDIAEEDLTEEVVSAD
KKRAFSVLNAQLERNLGQRKVRKQ
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgcctcgctcgacaggggacgaagatgcgacggcgcgcttcctggccaagtacggcgtg
gccaagcttgccgagcagtggaacttggcaccagaggtgtgcgccacgctaaccaagtta
aacattcgctcgttcttccccgtacaggccgtggccatccccaagatcctggccagtgac
agcgaccgcgtgacggatatttgcatctcggcgccaaccggcagtggtaagacacttacg
tatgtggtgcctatcgtgcagcgcctccttccacgcgtcgtatgtcgcgttcgtgcgctt
atcgtgctaccaagtcgcgatctggccgtgcaggtacatcagatcgtccagcagtttgtt
cagggcacacctcttaagtgcgggttagccatcggccagagcaacttcgcagcagagcag
aacgctctggtgggggccacttcagggaacaaagtgatcgccacaactgatggaggccgc
agcttggtggacatcctggtggccacacccggtcgtctcgtggatcacctggaacagacg
ccgggcttcacactgcagcaccttcagatcatgatcgtcgatgaggccgatagactgtta
aatcagtcgtaccaggactggatctcgaaggtctacgctagtgtctttaacggccaggag
gtggacgaggacggcctcacccttggcgtcggcgtcacttgtcgtcgccaggactccatc
aacagacgtcgcatccgtacgcctcttacaagagtattgctgtctgctacactgacacgt
aacccgaggaagctggccgccatcggtatgagcaatgctgagttgaccaagatcggccgc
attgacgacccgctggctgataacgcgaagttgggcaatgctggtgactcggatgatgaa
gatgaagacggtgacgaagctaccggatcgaagaaaatgtactcgacgcctacgaatctg
gatgagtactggatcgagtgtgacactggatcaaagccgcttgtgctgctggagctgctg
agcgagtttgcgggctcattgtccattgtcttcacggctagtgtgaactcgacccatcgt
ctggcccgactactccaattgtactctacccacccggagcgtattcgagagttctcgagt
agtctttcgcagaaacagagatcgtccttagtggcagactgcaaggctgggcgtgtggag
acggtcgtgtgttccgatgctatggcccgtggtatggatatcgaggatgtcgcgaacgtc
gtaaactacgacgtaccgtcgttcatcaagacgtacattcatcgtgtgggtcgtactgct
cgtgctggccgtcacggtcgctgtgtgacgcttgtgaaattgggccagatgaagagcatg
atgcgcatgctcaagaaagccgacaacaacaagttgaagccgtacgcgctccaacaggaa
cacatgaagacgctggtgcctcgatacactgaagcactgcaacagctcaaggacacgctc
gaagcagagaaggctggcaagctgcaggccacctctattcttcgcaagaataagatgtct
gtaagcggaggagacgacatcgcagaggaggatctgactgaggaagtcgtcagtgcagac
aaaaagcgagcgttctctgttcttaatgctcagcttgagcggaacttggggcaacgaaaa
gttcgcaagcaatag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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