KEGG   Phytophthora infestans: PITG_03978
Entry
PITG_03978        CDS       T01333                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 6, putative
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
pif  Phytophthora infestans
Pathway
pif03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PITG_03978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pif03021]
    PITG_03978
   03036 Chromosome and associated proteins [BR:pif03036]
    PITG_03978
Transcription machinery [BR:pif03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PITG_03978
   Coactivators
    SAGA/TFTC/STAGA complex
     PITG_03978
Chromosome and associated proteins [BR:pif03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PITG_03978
    STAGA complex
     PITG_03978
    TFTC complex
     PITG_03978
    SAGA complex
     PITG_03978
    SLIK complex
     PITG_03978
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa
Other DBs
NCBI-GeneID: 9467912
NCBI-ProteinID: XP_002907007
UniProt: D0MZ10
AA seq 436 aa
MSLLRPETLQVVAQSLGLDDISDECVCELLPEVELRVRQVVQDALKFQRHSRRPQLDPTH
VNQALQARNLESLYGFSAPGNVKYKPCEDNETLYFAEEEELELNELLNAPLGQIPLQPVL
NVHWLAVDGVQPLIPENASVEDDSTCHTSIKDEAFVSNVDRKPRVKHVLTEEMQLYYTKV
TEAVKSDDFELQRAALTSLAQDPGIHQLLPYFSRFIYEEVKHSNHDLSLLFSLMRACRCL
LVNQSLHVELYLHQLIPAILTCVLGTQLCENPADDHWALRKYAAKLVAQICERYGEKYAN
IQARVSKTYHKAITDPTCPFSTQYGALHGMLFLGPLVMESLLFPHLEKYYRRLEPALSSS
NPNLVQRLEAQNCLGILVHASGSYFSMSKSMDRSASSSLSSSAMGDIVTLLFEAFGESLL
PYIRPEQNDSMLNMCL
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagcttgttacggcctgagacgcttcaggtcgtggcacagagcctcggcctggacgat
attagcgacgaatgtgtgtgtgaacttctgccagaggtggagctgcgtgtgcgccaggtg
gttcaggacgcgctcaagttccagcgacactcgcggcggccgcaactggaccccacacac
gtcaatcaggccctgcaggcgcggaacctggagagcctgtacggcttttcagctcctggt
aacgtcaagtacaagccttgtgaggataatgagacgctatacttcgcagaggaggaagag
ctggagctgaacgagctgctgaacgccccgctgggccagatcccgctgcaacctgttctt
aacgtccattggctggcagttgatggcgtgcagccgctaatacccgagaacgcgtcggtg
gaggacgattcgacatgccacacgtccattaaggacgaagccttcgtcagtaatgtggac
aggaaacccagagtcaagcacgtgctgactgaagagatgcaactttactataccaaggtc
acagaggcggttaaaagcgacgacttcgagctacaacgtgcggcgcttacgagtctcgca
caggacccaggcattcatcagctgctgccctacttttcacgcttcatttacgaggaagtg
aagcacagcaaccacgacctgtcgctgctcttctcgctcatgcgagcgtgtcgctgtctg
cttgtaaaccagagtctgcacgtggagctctatctacaccaattgattcctgccattttg
acgtgtgtgctcggcacgcagctatgtgagaaccctgcagatgatcattgggcgctgcgc
aagtacgccgccaagttggtggctcagatctgcgagcggtacggcgaaaagtacgccaac
attcaggcacgcgtgtccaagacataccataaggcaatcacagaccctacgtgtccattc
tcaacgcagtatggtgcccttcacgggatgctcttcttgggtccactcgtcatggagagt
ttgctcttcccccacctggagaaatactaccgacgactggagcctgcactatcatcgtcg
aaccccaatcttgttcaaagacttgaggcgcagaactgcctcggtatcctcgtccacgca
tccgggagttatttttcaatgtccaagtcaatggaccgcagtgcttcgtcgtcgttatcg
tcgtctgcaatgggtgatattgtgactctgctgttcgaagcgtttggcgagagcctctta
ccttacattcgaccggaacagaacgatagtatgctcaatatgtgcctctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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