KEGG   Phytophthora infestans: PITG_07047
Entry
PITG_07047        CDS       T01333                                 
Name
(RefSeq) THO complex subunit, putative
  KO
K12878  THO complex subunit 1
Organism
pif  Phytophthora infestans
Pathway
pif03013  Nucleocytoplasmic transport
pif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PITG_07047
  09122 Translation
   03013 Nucleocytoplasmic transport
    PITG_07047
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pif03019]
    PITG_07047
   03041 Spliceosome [BR:pif03041]
    PITG_07047
Messenger RNA biogenesis [BR:pif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     PITG_07047
Spliceosome [BR:pif03041]
 Complex C
  Other components
   EJC/TREX
    PITG_07047
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PITG_07047
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 9464010
NCBI-ProteinID: XP_002905013
UniProt: D0N746
AA seq 595 aa
MALELAKTAEASIGDFFARDDALSRLDRLHRRTLEAVENVLKTPRPQEFTHNVLDLAVQK
VVEKLSWKFMTEAHATPSSVGVPALLDLCIAGVTSGFLVNSTPYKVLEDLMEGQTINTCE
KVWDLLESRKDKLTTGRTTKASLCLLRMCNALLRRLSKTHNSVFCGKILVFLSFTFALSE
RSAVNLTGKANVTNIDSDPSADVGPIDYNLYRTFWDLQGFFREHQMATQSAENWEKFFTE
LNVVLAAFEGNAFSPDDLERSRDLTEGPIHSADIAMHESDGDSDKNATDHNTQEHFFQPK
YLTNSRLFRLQLRDPILRECMLTQFLILFNDLARAKPPLGSTTPKAKLAELTERVVALLK
QTPSDGEGFSEMVTYVLERERNWVKWKQEKCPGYERYPSAKEKDASTASKPVVKRARRQL
TSPLLEQILSESSKPSQILEKIKGKERATEVSLATYTDRFKEAWDPENGIEEEYWPDKDE
MVCWRTMRAAMKESVGHLELAVQGTGSLVKGILGLDTNDASKDSVDASTLTPKAEDEHVK
EEQNDEKKPEKDVSKDNATGAKRERDGSPKRAPAKRERTGRARVRDDDIEDGEEA
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggcgctggagctggccaagacggcggaggcctcgatcggcgactttttcgctcgcgat
gacgcgctgtcgcgtctggatcggctgcatcgccgcacgctggaggctgtggagaatgtg
ctgaagaccccgcgaccacaggaattcacacacaatgtgctggatttggcagtgcagaag
gtggttgagaaattgtcttggaagttcatgacggaggcccacgccacgcccagcagcgta
ggtgtcccagcgctactagacctgtgtatcgccggtgtgaccagcggattcctggtcaac
agcacgccctacaaagttctggaggatctgatggaaggccagaccatcaatacatgcgag
aaggtgtgggatctgctcgagtctcgcaaggacaagctcacaacgggccgcaccaccaaa
gcttcgctgtgtctattacgaatgtgcaatgcgctactacgtcgcttatccaagacccac
aacagcgtgttctgcggcaaaatcctggtgttcttgtcgtttacgttcgcactgtctgag
cgatcggcggtgaatctgacgggcaaagccaatgtgacgaatattgacagcgatccaagc
gccgatgtcggtccgatcgactacaatttgtaccgcacgttttgggacttgcagggtttc
ttccgagagcatcagatggccacgcagtcagcggaaaactgggagaagtttttcacggag
ctgaatgtggtgctggcagcgtttgaaggcaacgcgttctcaccagatgacctggagcgc
tcgcgagacttaaccgaaggccccatccattcagcagatatcgctatgcacgagtctgat
ggcgattctgacaagaacgctacggaccacaacacccaggagcactttttccagcccaaa
tacctgaccaacagccgtctcttcagactgcaattgcgtgacccgattctgcgtgaatgc
atgctcacccagttcctcattctgttcaacgacttggcaagggccaaaccgcctctgggc
agtacgacgcccaaggcaaagctcgcggaactgactgagcgtgtagttgcattgctgaag
caaacaccttcggatggcgaaggcttcagtgagatggtgacttacgttctggagcgggag
cgcaattgggtcaagtggaagcaggaaaaatgtccaggatacgagaggtatccatctgcg
aaggagaaagacgcttcgactgcttcgaaaccagttgtgaagcgtgcacgacgtcaatta
acctcacctcttctagagcagattctgtcggagagctccaagccatcgcagatcttggag
aagattaagggcaaggaaagagctacggaagtctcgttggcaacgtatacggaccgcttt
aaagaggcgtgggaccctgagaatggcattgaagaggagtactggccggacaaggatgag
atggtctgctggcgcacgatgcgtgctgcgatgaaagaaagtgtgggccatttggaactg
gcggtccagggtacgggctctctggttaagggcattcttggacttgataccaatgacgca
agcaaggattcagtggatgcctccaccctaacacccaaggctgaagatgaacatgtgaaa
gaagagcaaaatgacgagaagaagccggagaaagatgtgtcgaaggacaacgcaaccggt
gcgaaacgagaacgagacggctctcctaagcgtgcgccagctaagcgcgaacgaacggga
cgtgctcgagttcgtgacgacgacatcgaggatggtgaagaagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

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