KEGG T01333: PITG

Phytophthora infestans: PITG_15486

Entry

PITG_15486 CDS T01333

Definition

general transcription factor IIH subunit, putative

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

pif Phytophthora infestans

Pathway

pif03022	Basal transcription factors
pif03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:pif03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pif03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

301098671

NCBI-GeneID:

9478546

UniProt:

D0NRC9

AA seq 483 aa
MDAFDFLETLPPATLERLYQDPWACQAIFQALPSLAQQFVMRLLPTNSAVPRDLLEQWVV
PIPGETKRMPPQFNAALQKLEGLRVFVQQDGGYKPHPTFQKQLMYALSNLGGSPWERGRL
HLPRDPENTFAAVDLERYARARWDLVLHYMVGSTAVQEPPQSVVDILLRTKLLQASGADS
RALHITDTGYEFMLKDIHVQMWIFMLEYIRTLDNTGTLKQEDILQFLFQISYCQTGGYYA
VADLTETQRLLLGDFIDFGLLFRKRQNSDRFYTTSLAVNLIFGGSTGQKRSHVSLTSSFA
GVRAGMKSQVADPRQAPTVDHGARLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPN
LAIGFITRESLRSALIHGISAQQIYDFLMKHAHPKMRRNSPVIPENIADQIYLWERERNR
VQFLEGILFDGFNTKEDYESVRDYAKGLMVLTWSDPIHFRLSIATAGIDEVRHFIQNQVS
TRG

NT seq 1452 nt +upstreamnt +downstreamnt
atggatgccttcgacttcctcgagacgctgccgccggcaacgctggagcgtctgtaccag
gatccatgggcgtgccaggctatcttccaggctctaccatctcttgctcagcagttcgtg
atgcgtcttctgcccacaaactctgccgtaccgcgtgatctactggagcaatgggttgtg
ccaataccaggagaaaccaaacgcatgccgcctcaattcaacgccgcgttgcagaagctg
gagggacttcgagtgtttgtacagcaagatggaggctacaaacctcacccgacgttccag
aagcagctcatgtatgcgctgagcaacttgggcggatctccgtgggaacgtgggcgacta
catcttcctagggacccggagaacactttcgctgcggtggatcttgagcggtacgcgagg
gcacgctgggacttggtgctgcactacatggtggggtctacagcagtacaggagccgcca
cagtccgtggtggacatcctactgcgtacaaaactactgcaggcaagtggggcggactcc
agggcgctgcatatcacagacacgggctacgagttcatgctgaaggacatccacgtgcag
atgtggatctttatgttggaatacattcgcacgctggataacacgggcaccctgaagcag
gaggatattctgcagttcttgttccagatcagctactgccagacgggagggtactacgca
gtagcagatctgacggagacccagcgactattactcggagatttcattgacttcggacta
ctgttccgaaaacgccaaaattcggatcgcttctacacaacaagtctggctgtgaacctc
attttcggtgggtccacgggacagaagcgtagccatgtcagtctcacgagctcgtttgct
ggtgttcgtgccggtatgaagtcgcaagtggcagatccgcgtcaggccccgacagtcgat
cacggagctcgtctgcttgtggtggtggagacaaacttcaagatctacgcgtacacttcg
tcgactcttcatgtggctatgctcagcgtgtttgtggacattgtggcacgactaccgaac
ttggccattggcttcatcactcgagagagtctgcgctctgctctgattcacggcatctcg
gcccagcagatctacgacttcttgatgaagcacgcgcacccgaaaatgcgacgcaacagt
ccagtgatccctgagaatattgctgaccagatctacttgtgggaacgcgagaggaatcgc
gtacagtttctggagggaattctattcgacggtttcaacaccaaggaagactacgagagt
gttcgggactacgccaagggtctcatggtgctcacatggtcggatcccattcacttcagg
ctgtcgattgctactgcaggtattgacgaagtacgccactttatccagaaccaagtatcg
actcgaggataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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