KEGG   Psychromonas ingrahamii: Ping_2270
Entry
Ping_2270         CDS       T00450                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
pin  Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:pin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pin03016]
    Ping_2270
Enzymes [BR:pin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Ping_2270
Transfer RNA biogenesis [BR:pin03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Ping_2270
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2
Other DBs
NCBI-ProteinID: ABM04011
UniProt: A1SWZ6
Position
2756575..2758545
AA seq 656 aa
MFQNNPLLSQLKKQIQEDIPKRQGKVKATDRGYGFLETDKGKRFFIPPSEMKKVLHGDQI
NAFIRGKGDKSTAEPNQLKKTGSAVFIARLVIKQKNISIIPKNPLLKGFFKIKGSQSLQS
RGYQDGDWVKVELVSHALEGNGFLTQIIEKIADASDPFAYRLLTVATHNLANKAPEFDHP
WKIIDPQLSRSDLTKTPFFTIDGVNTQDMDDALYIEADENGWKLTVAISDPSAYVPENSD
MDAEAKRRAFTLYLPNFNVPMLPRDLSDSLCSLKEGEKRATLCCTIHINKKGEIEGEPAF
YGAWIKSHYRLNYTDVSNYLENEELSNDCWKPSTQLAEQLRTLDSLSLKRLQWRTDNNAV
FKNQPDYTLKLNNKGEISEILCEPRRSANRLVEESMIAANICAGDFLAKHKQQGVFNTHS
GFSSERLGKVVSLLSEFGIESDIQTLATVTGYTKIRQQTNLLHNSYLDHRLRKLLSYADI
KNTPEAHFTLGVDHYATWTSPIRKYGDLLNHRLIKSVLLKEDNIQIDNEIGQVLNAARKL
QRLAERDVNNILYSQYLKNQVESKWRYKAEIFDIIKAGIRVKIQENGATFFIPCSLLCKD
SSDATKIDCNQALGKVIIAQQTELQLGDVIDVMLNNVKVESGQLIGKLAESLTISE
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgtttcagaacaatccgttgctaagtcaattaaaaaaacaaattcaagaagatattccc
aaacgtcagggaaaggttaaagcaactgatcgtggttatggctttttagaaacagataaa
ggtaaacgtttttttatcccgccaagtgagatgaaaaaagtattacacggcgatcaaatt
aatgcatttattcgtggtaaaggtgataaatcaactgcggagccaaatcaactcaaaaaa
acaggttcagctgtttttattgcacggttagttatcaagcaaaaaaatatctctattatt
ccaaaaaatcccctgcttaaaggattttttaaaataaaaggcagccaatctttgcaatcc
agaggatatcaagatggtgattgggttaaagttgaattagtaagccatgcgctcgaagga
aatggttttttaactcagattatcgaaaaaatagccgatgccagtgatccttttgcctat
cgtttattaaccgtcgcaactcataacctagccaacaaagcccctgaatttgatcatcca
tggaaaattattgatccacaattatcccgtagcgatttaactaaaacccccttttttact
attgatggtgttaacacccaagatatggacgatgcactgtacatcgaagctgatgagaat
ggttggaaattgaccgtcgcgatctcagatccatccgcctacgtaccagaaaatagcgac
atggatgctgaagctaaacgtcgtgcctttacgttatatctacctaattttaatgtgccc
atgttgccgcgtgatttgagtgacagtctttgctcattaaaagagggcgaaaaacgggca
acactctgctgtactatccatattaataaaaagggtgaaattgagggtgaacccgcattt
tatggcgcatggataaaatctcattatcgccttaactatacggatgtttccaattatctc
gaaaatgaagagctcagcaatgattgttggaaacccagtacacaacttgccgagcaactg
cgcactttggattcgctctccctaaagcgtctacaatggcgaactgataataatgctgtc
tttaaaaaccaacctgattacaccttaaaactaaacaataaaggtgagatttccgaaata
ctctgcgaaccaaggcgcagtgctaatcgcctggtagaggaatcgatgattgccgccaat
atatgtgcaggtgactttttagcaaaacataaacagcaaggtgtgtttaatacccattca
ggtttttccagtgagcgcctgggaaaagtagtctctttactgagtgagtttggcattgaa
agtgatattcaaacattagccaccgttacaggttatacaaaaatacgccaacaaacgaat
ttattgcacaacagttatctggaccacagattgcgtaaactgctcagttatgccgatatt
aaaaacacaccagaagcacattttacccttggggtcgaccactacgcgacgtggacttct
cctatccgcaagtacggtgatttacttaaccatcgtttgattaaatcagtgttgttaaaa
gaagataatattcagatcgataatgagatcgggcaggtgcttaatgcagcccgtaaatta
caacgtttagccgaaagagatgttaataatattctttacagtcaatatctaaagaatcag
gtagagtccaagtggcgctataaagcggagatttttgatattattaaagcgggtatccgg
gtcaaaatacaagaaaatggggcgactttctttatcccttgctcactactgtgcaaagac
agcagcgatgccacaaaaatcgactgcaatcaagcattaggaaaagttattattgcacaa
caaaccgaattacaactcggggatgtgattgatgtgatgcttaataatgtcaaagtggaa
agcggtcaattaatcggaaagcttgccgaatcattgacaattagcgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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