KEGG   Pirellula sp. SH-Sr6A: VN12_19090
Entry
VN12_19090        CDS       T04360                                 
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
  KO
K02843  lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir00540  Lipopolysaccharide biosynthesis
pir01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pir00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    VN12_19090 (rfaF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:pir01005]
    VN12_19090 (rfaF)
Enzymes [BR:pir01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.24  lipopolysaccharide heptosyltransferase II
     VN12_19090 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:pir01005]
 Core region
  VN12_19090 (rfaF)
SSDB
Motif
Pfam: Glyco_transf_9 Glyco_trans_4_4
Other DBs
NCBI-ProteinID: AMV34239
UniProt: A0A142Y4U5
Position
4757275..4758348
AA seq 357 aa
MATPTLRAIAQLPSVEELVLVGKPGPLSVLEGLPFAQHQIAYKPRSRSPELLSRRGVAAE
LRRRHLDAIVLLPNSLSTGLIAWLSRIPRRIGYVKNGRGLLLTDAIAIRTTLERPNADGS
LTSRTSINWSRQPAIDYYLHLAEQLGASSSDRRMELAVRETDRVEAERLLDRVGFDRTRK
LILINNASGSSPARLWPQEYAVQLAKRLAESGHQVLFHAGPADRQVSLAYATAANHSAVQ
SMGVAEQLPLGLSRGLIAAADLLVTTDSGPRHIGVALNKRVLTMFGPTDTAPTRTYNVPE
IALETQQSCRPCGKDICPLQHHKCLRDLGPDTLVKAIATLLADSPLSLQPSTTTSAA
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcaacgccgacgctacgtgcgatcgcgcagttgccatccgtggaggaattggttttg
gtaggaaagcccggaccactttcagttctagaagggctcccatttgcccaacaccaaatc
gcctacaaacctagatctcgctcccccgaattgctgtcgcggcggggggttgctgcagag
ctgcgtcggcgccatctcgacgccatcgtgctgctgcctaactccttgtcgaccggattg
atagcatggctttcccgtattcccagacgcatcggctatgtcaagaacggccgcggcctt
ctcctgacggacgccatcgcgattcgcaccaccttggaacgccccaatgccgatggatct
ttgacgtcccgaaccagcatcaactggtcacggcagcccgccatcgattactaccttcac
ctagcagaacaattaggggcttcctcctcggatcgccggatggaattagcggtgcgagaa
actgatcgcgtcgaagcggaaagattgttggatcgagtgggattcgatcgaactcgcaaa
ttgatcctcatcaacaacgcctcggggagttcacccgcgcgactttggccccaagaatac
gcagtgcagctcgcaaaacgtctggcggagtcggggcatcaagtcctctttcacgcaggt
cctgccgatcgccaggtctcgctggcgtatgcgactgccgcgaatcattccgcagtacaa
agcatgggagtcgccgaacagctcccgttaggactttcgcgaggattgatcgcggcagcg
gacttgctggtgacaaccgatagcgggcctcgccacatcggagtggccctcaacaaacga
gtgctgacgatgttcggcccaaccgacacagccccgactcgaacgtataacgttccagag
atagctctggagactcagcaatcgtgccgcccttgcggaaaggacatctgtcccctgcag
catcacaaatgcctgcgagatctcggacccgataccctggtcaaagccattgccaccttg
ctagcagactcaccattgtcgcttcagccatcgacgacaacatccgccgcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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