KEGG   Pirellula sp. SH-Sr6A: VN12_22945
Entry
VN12_22945        CDS       T04360                                 
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir00970  Aminoacyl-tRNA biosynthesis
pir01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pir00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    VN12_22945 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pir03029]
    VN12_22945 (gatB)
Enzymes [BR:pir01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     VN12_22945 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     VN12_22945 (gatB)
Mitochondrial biogenesis [BR:pir03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    VN12_22945 (gatB)
SSDB
Motif
Pfam: GatB_N GatB_Yqey
Other DBs
NCBI-ProteinID: AMV35002
UniProt: A0A142Y7J0
Position
complement(5612159..5613640)
AA seq 493 aa
MSHLYRTVIGLEVHVQLKTATKLFCRCRTDFGASPNTQVCPVCLGLPGSLPVLNDTAIRY
ALRAGIGLHSEIARFTKWDRKNYFYPDLPKGYQTSQFDLPICGPGYLEIESLDDTGAPCP
KKIRILRAHLEEDAGKSLHDEVAGKADTRIDLNRAGTPLLEIVSEPDLRSAEDAKNYLVE
MRLLMMYLGITDGNMQEGSLRADANVNLHIQRDGKWVATPIVEIKNLNSFRSVERAIQYE
SQRQYEQFLADGKTIGEAPKQTRGWDDDAGVTEMQREKEDSADYRYFPCPDLVPVLISDA
DIAREQPAAAITPRSARENLVGSLGLRPADAEILIQQGRETVEYFLAVVKAGATPKRAIA
WMLQDVLRILNDRAISVAEFPIPASALALILIAIEKGTLDTARGREVFAKLLDAPEQAVE
ALIQAHGVVAVDAGELESLCRELLNENPDVIAKVKSGNAKAISALIGQARKKNKNADPRQ
VQETCLQLIETSY
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtcacatctttaccgaaccgtaattggacttgaagtccatgtccaactgaagacagcg
acgaagttgttctgtcgatgccgcaccgattttggagcctcgccaaacacccaagtctgc
ccggtttgcctcggcctccccggctccctcccggttctgaacgataccgcgatccgatac
gctcttcgcgccggaatcggtcttcactccgaaatcgcacgtttcacgaaatgggaccga
aagaactacttctatcccgatctcccaaaaggctaccaaaccagccagttcgatctgccc
atttgcgggcccggatatctcgaaatcgaatcgctcgatgacacaggggctccttgccca
aagaaaattcgcatcctccgcgctcacctggaagaggacgctggcaagagcctacacgat
gaagtagccggtaaagcggacacgcgaatcgatctcaaccgggccggaactcctttgctc
gaaatcgtatcggaacccgatctccgaagcgcagaagatgccaaaaactatctcgttgaa
atgcgcctcctcatgatgtacttaggtatcacggatggcaacatgcaggaaggctcgctc
cgcgccgatgcgaacgtaaacctccacatccaacgcgacggaaagtgggtcgccaccccg
attgttgaaatcaaaaacctaaacagcttccgttccgttgaacgcgcgatccagtacgaa
agccaacgccaatacgaacaattcctcgccgacgggaaaacgattggtgaagcccccaag
cagacgagagggtgggatgacgacgcgggcgtgaccgaaatgcaacgcgagaaagaagat
tcagcggactatcgatatttcccttgcccagatctcgttcctgttctgatctccgatgcc
gatatcgcacgcgaacaacccgccgcggcgatcactccacgctcggctcgcgaaaatctc
gtcggctccctcggactccgacccgccgacgcggaaattcttattcaacaaggccgtgag
acggtggagtacttcctcgctgttgtcaaagctggagcaactcccaaacgcgcgatcgct
tggatgctccaagacgtgctgcggatcctgaatgatcgtgccatctctgtcgccgaattc
cccatcccagcctccgccttggcccttatcctcatcgccatcgaaaaaggaaccctcgac
acagcccgcggacgcgaagtgtttgcaaaacttctcgatgcaccggagcaagcggtcgaa
gccctgattcaagcgcacggcgtggtggccgtcgatgcaggcgagctggagtctctgtgc
cgggagctcttaaacgagaaccccgatgtgattgcgaaggtcaaatcagggaatgcgaaa
gccatctcggcgttgatcggtcaagcccgcaagaagaacaagaatgcggacccgaggcag
gtccaagaaacctgcctccaactcatcgaaacgtcctactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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