KEGG T00444: Pisl

Pyrobaculum islandicum: Pisl_0247

Entry

Pisl_0247 CDS T00444

Gene name

sdhA

Definition

succinate dehydrogenase flavoprotein subunit

Orthology

K00239

succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]

Organism

pis Pyrobaculum islandicum

Pathway

pis00020	Citrate cycle (TCA cycle)
pis00190	Oxidative phosphorylation
pis00650	Butanoate metabolism
pis00720	Carbon fixation pathways in prokaryotes
pis01100	Metabolic pathways
pis01110	Biosynthesis of secondary metabolites
pis01120	Microbial metabolism in diverse environments

Module

pis_M00374

Dicarboxylate-hydroxybutyrate cycle

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pis00020]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:pis00650]
Metabolism; Energy metabolism; Oxidative phosphorylation [PATH:pis00190]
Metabolism; Energy metabolism; Carbon fixation pathways in prokaryotes [PATH:pis00720]
Metabolism; Xenobiotics biodegradation and metabolism; Toluene degradation

SSDB

Motif

Pfam:

FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA FAD_oxidored HI0933_like FAD_binding_3 NAD_binding_8 Thi4 AlaDh_PNT_C Pyr_redox

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(240273..242000)

AA seq 575 aa
MDLLIYDVVVIGSGLAGLRAAVAAALRGVSVAVVTKTSGPRSHSISAEGGMAAVVHPEKT
GDSPELHAYDTVKGGDFLVDQEAAIVLAREAPAEVKFLDSIGVPWSRDPDGTYSLRMFGG
MSKPRTVFAKDRTGFYIMTALYRYAKSFHNIHFYEEYFVTTLVVKNDVFYGLVALDMRRG
ELVGFVAKAGVIAAGGAGRLYRMTTMGWLNTGEVLGYALKAGAALRDMEFVQWHPTALVP
SGILISEAARAEGGYLVNRHGERFMKRYAPEKMELAPRDVVSRAIITECMEGRGFLHESG
LCYVGLDVRHIDRKRLEERLPLLLELSKTYAGVDPTTELIPVRPAVHYFMGGIYTDVRGR
VLNHRGEWIRGLWAAGEAASTGVHGANRLGSNSLTECAVWGRIVGEEAAVYAMGRPALST
TVVRLEIQKEEERIAKLIKNEHGGMTPLSLRAKLQDLMERGAGIVRHGSVTSEALRRLNK
LFDMLKEVRITDGGRIYNMELREVLELYGMLYAAQAVLTGALLRRESRGAHYRLDFPRRD
DDWLVHTVYYLYGDTLHVSTTKVEITRWMPETRRY

NT seq 1728 nt +upstreamnt +downstreamnt
atggatttacttatatatgacgtagtggtaataggcagcggcctagctggactgagagca
gcagttgccgcagccctccggggggtctcggtggccgtggtcaccaagacctcgggcccc
cggtcccacagcatctccgccgagggcgggatggcagcggtggtacacccggagaagacc
ggcgacagcccggagctccacgcctatgacaccgtgaagggcggggacttcctggtagat
caagaggcggctatagtgctggcgagggaggcccccgccgaggttaagttcctggactcc
atcggggtgccctggagcagagaccccgatggaacctacagtctgaggatgttcggcggt
atgtctaagcctaggacagtctttgcaaaggataggacaggattctacataatgacagcg
ctgtatagatatgccaagtctttccacaatatccatttttacgaagagtactttgtcacg
acgctagtggtgaaaaacgacgtcttctacggcctggtggcgttagacatgaggagggga
gagctggtggggtttgtggccaaggccggcgtcatcgcggcagggggcgcggggagactc
taccgtatgaccaccatggggtggctaaacacgggcgaggttctgggctacgcgcttaag
gcaggcgcggcgctgagagatatggagtttgtccagtggcaccccacggcgctggtccca
agcggcatattgataagcgaggccgccagggccgaggggggctacctcgtgaatagacac
ggcgagaggttcatgaagaggtacgcccccgagaagatggagctggcgccgagggacgta
gtgtctagggcaataatcaccgagtgcatggagggtagggggttcctccacgagtcgggc
ctctgctacgtaggtctcgacgttaggcacatagataggaagagactagaggagaggcta
cccctcctcctggagctctctaagacctatgccggggttgatccaaccacggagttgata
cccgtgaggccggccgtccactacttcatgggcggaatatatacagacgtccgggggagg
gtgctgaaccacaggggtgagtggatccggggtctctgggcggctggggaagccgcctct
accggcgtacacggggctaacagactgggctccaactccctaactgagtgcgccgtctgg
gggaggattgtgggagaagaggcggctgtctacgcaatggggaggccggccctcagcact
actgtcgtaagactagagatacagaaggaggaagagcgaatagcgaagctcataaaaaat
gaacacgggggtatgactccgcttagcttaagagctaagctacaagacctcatggagagg
ggagctggcatagttagacacggtagcgttacctctgaggctctacgaagacttaataag
ctgtttgatatgttaaaagaggtaaggattacagacggggggaggatttacaatatggaa
ttgagagaagtacttgagctatacggcatgttatacgccgcccaggccgtgctgacaggc
gcccttttgagacgagagtctagaggagctcactaccgtctagatttccctaggcgcgat
gacgactggcttgtacacactgtgtactatctatatggcgacactttgcacgtctcaacg
acaaaagtggaaatcaccagatggatgccggagacaaggagatattga

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PIS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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