KEGG   Paenibacillus sp. JDR-2: Pjdr2_2492
Entry
Pjdr2_2492        CDS       T00977                                 
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pjd  Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pjd03032]
    Pjdr2_2492
   03036 Chromosome and associated proteins [BR:pjd03036]
    Pjdr2_2492
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pjd02048]
    Pjdr2_2492
Enzymes [BR:pjd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Pjdr2_2492
DNA replication proteins [BR:pjd03032]
 Prokaryotic type
  DNA Topoisomerases
   Pjdr2_2492
Chromosome and associated proteins [BR:pjd03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Pjdr2_2492
Prokaryotic defense system [BR:pjd02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Pjdr2_2492
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Ish1 VWA MHB
Other DBs
NCBI-ProteinID: ACT01147
Position
2865423..2867393
AA seq 656 aa
MAEQVDLFAKTAAPERNYEADDIQVLEGLTAVRKRPGMYIGSTSSSGLHHLVWEIVDNAV
DEHLAKFCTAIDVTLHKNGAVTVQDNGRGIPTGMHKTGIPTPQVVYTILHAGGKFGGGGY
KKSGGLHGVGASVTNALSEWLEVEIFRDGKIHKMRFEYWVDNKGKEHVGEPVTGLEITGN
TNRTGTKVTFKPDGRVFQGGTSLNYDTLAERLQEIAFLNSGLKVTIKDDRSGKEDIFHYE
GGARQFVQYLNDDKTVLHDVVHFAGEKDEIEVEVALQYNDGYTETIASFVNSIPTRGGGT
HETGFKTAYTRVMNEYARKAGLLKEKEKNLEGNDLREGMMSVINIKMSEVEFVGQTKDQL
GSASARSAVDAVVSDKMQVFLEENPQVAQMLLKKAVQASKAREAARKAREEIRSGKKKSE
SSNLNGKLTPAQSKDFSRNELFIVEGDSAGGSAKQGRDSKHQAILPLKGKPMNPEKAKLL
DILKNEEYKAIISAIGAGVGPEFDAEECNYNKIIIMTDADTDGAHIQVLLLTFFYRYMKP
LIDTGRVYIAQPPLYKITRKSGKLETVRYAWTDEQLQNYLKEFGKNFELQRYKGLGEMNP
DQLWETTMDPETRTLLQVQIEDAAKAERRVSALMGDKVDPRKRWIIENVDFTEYVE
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggcagagcaagtagatcttttcgcaaaaacagcggccccggaacggaattacgaggcc
gatgacatacaagtgctcgaaggcttgaccgctgtcagaaagcggccgggcatgtacatt
ggcagcacgagcagctccggcctgcatcatctggtctgggaaatcgtcgataatgccgtg
gacgagcatttggcgaaattttgtacggcgattgacgtcacgctgcacaagaatggcgcg
gttaccgtacaggataacgggcgcggcattccgacagggatgcataagacaggaattcca
acaccgcaggtcgtttacaccatcttgcacgcgggaggcaagttcggcggcggaggatac
aagaaatccggcggtctgcacggcgtaggcgcttcggtgacaaacgcattatccgagtgg
ctagaagtggaaattttccgtgacgggaaaatacataagatgcgcttcgaatactgggta
gacaataaaggcaaggagcatgtcggcgagccggtaacaggccttgagattacggggaac
acgaaccggacgggcaccaaagtaacgttcaagccggacggccgtgtcttccagggcggt
acctcgctgaactacgatacgctggccgagcgcctgcaggaaattgcattcctgaactcg
gggcttaaggttacgatcaaggatgaccgcagcggcaaagaggatattttccactacgaa
ggcggcgcacgccagttcgtgcaatatttgaacgacgacaagaccgtcctgcatgatgtc
gtccatttcgcgggagagaaagacgagattgaagtggaggttgcccttcagtacaatgac
ggatataccgagacgatcgcttccttcgtgaactcgatcccgacacgcggcggcggcacg
catgagaccggtttcaaaaccgcttatacgcgggttatgaacgaatacgcccgcaaagct
ggtctcctgaaggagaaggaaaagaatctcgaaggcaatgacctgcgcgaaggcatgatg
tcggtcattaacatcaagatgtccgaggtcgaattcgtcggccagacgaaggaccagtta
ggcagcgcatcggcccgcagcgcggtagacgccgtagtgtccgacaaaatgcaggtgttc
ctggaagagaatccgcaagttgctcagatgcttctgaagaaggctgttcaagcctccaag
gcaagggaagcggcgcgtaaagcgcgcgaagagatccgaagcggcaagaagaagagcgaa
agctccaatctgaacggcaagctgacgccggcgcagtcgaaggatttctcgcgcaatgag
ctgtttatcgtcgaaggggattccgcgggcggttctgcgaagcaaggccgggattcgaag
catcaggcaattctgccgctgaaaggcaagccgatgaatccggaaaaggcgaaattgctg
gatattctgaagaacgaggaatacaaagcgattataagcgccattggagcgggcgttggt
ccggagtttgacgcggaagaatgcaattacaacaaaatcattataatgaccgacgcggat
acggacggcgcgcacattcaggtgctgctgctgacgttcttctaccggtacatgaagccg
ctgatcgacaccgggcgtgtctatatcgctcagccgcctttatacaaaattacgcgcaaa
tccggcaagctggagacggtccggtatgcctggacggatgagcaactgcaaaattatctg
aaggaattcggcaagaactttgagcttcagcgttacaaaggacttggcgagatgaaccct
gaccagctgtgggagaccacgatggatccggagacgcggacgcttctgcaggtgcagatc
gaggatgcggcaaaagcagaacgccgcgtgtccgcgctgatgggcgataaggttgacccg
cgtaagcgttggattatcgagaacgtggacttcacagaatacgtagaatag

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