KEGG T00977: Pjdr2

Paenibacillus sp. JDR-2: Pjdr2_2523

Entry

Pjdr2_2523 CDS T00977

Definition

family 2 glycoside hydrolase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

pjd Paenibacillus sp. JDR-2

Pathway

pjd00052	Galactose metabolism
pjd00511	Other glycan degradation
pjd00600	Sphingolipid metabolism
pjd01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:pjd00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:pjd00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:pjd00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_N Glyco_hydro_2_C Glyco_hydro_2 CBM_6 BetaGal_dom4_5

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2900043..2903516)

AA seq 1157 aa
MSQKQKLNNDWFFSKHPLGTELDAILQGGIDWSPITLPHDWLIYDSNNLYENSIGWYRKA
IRFEDLPANKKFALRFEGVYMNSTVYVNGRVAGTWKNGYSTFEFDITSLLTRGENEILVQ
VIHESPNSRWYSGAGIYRPVWLITSPDTRIASDGIYISAKKNTSGTWSVDIDTEVVFANL
TDSSGIKLRHTILDAAATVISQSEALIQPESGSTAAFNQVLAVQQPRLWDLDEPSLYKLQ
TELIVEGNVLDSEEQNFGFRTFDFDTEKGFFLNGRPVKLQGVCQHHDLGSLGAAVNKTAL
RRQIALLQEMGVNAIRTAHNMPAVELMELADEMGVLIVSEAYDMWERAKTPYDFARFYKD
WWKKDIASWVRRDRNHPSMLMWSIGNEIYDTHADERGQTLTVELRDKVHFHDPKGNAVVT
IGSNYMPWENAQKCADLVQFAGYNYGDKYYKQHHEEHPDWYIYGSETCSTVQSRGIYHFP
LAQSVLADDDEQCSSLGNSSTSWGAKSTEACIIADRDAAFSLGQFLWTGFDYIGEPTPYH
TKNSYFGQIDTAGFKKDAFYIYQAEWTDYRVKPMVHIFPYWDFSEGQLIDVRVSSNAPKI
ELFFNDNSLGTYDIDHVHGQKLLGEWQIPYTKGILRAVAYDESGNVIATDIQSSFGDAET
VLLTPDKTAIAADGSDLVFIEISALDRNNLPVANANNRIHVTVEGPGRLVGLDNGDSADY
DSYKGTNRRMFSGKLLAVIAPTLESGTITVRAVSNGLAAGEVTLTAVAPEPSTPGNENTL
YAYAPGQAAETSSGSAASDDEIPVRKLEIICPQGNALSAENRALPVQVVIHPSQATYRDV
EWRVTNAAGVDANIATLEADGHHAAVNALSDGEFYIRCATKNGADNIRLYSLMEFRTDGV
GQAFINPYEFVSAGYHSESSRNLTNGNERGVATSRDGESWICFDNIDFGSYGADEITLPI
FSLDSERFTIDLWEGIPGEPSASLLAQITYQKPTKWNVYQEETYRLPRRLTGITSLSFVL
QRKIHLSGFQYKKAIKAFERLEALENNQIYGDTYTLTDQTIENIGNNVSLVFRDMDFGDT
GTSKLAICGQSPIDNNTIHILFSGADGETKQLVEFAYTEDYCEKEYALERITGLQTVTFM
FLPGSQFNFKSFQFLPE

NT seq 3474 nt +upstreamnt +downstreamnt
atgagccagaaacaaaagctgaataatgactggtttttctccaagcacccactcggtaca
gagcttgatgccatcctgcaaggcggtatcgactggtcgcctattacactcccgcatgac
tggttaatctatgactctaacaatctgtatgagaacagcatcggctggtaccgcaaagcg
atccgcttcgaagaccttcccgcaaataagaagtttgcgcttcgctttgaaggcgtttac
atgaattcgacggtttatgtgaacggtcgtgttgccggtacgtggaagaatggctactcg
acctttgaattcgatatcacctccttgcttacaaggggcgaaaatgaaattctcgttcag
gttattcatgaatctccgaactcccgctggtattccggggcaggaatttacaggccggta
tggctcattacctcgccggatacccgtatcgcctccgacggcatttatatttccgctaaa
aagaatacaagcggtacctggtctgttgatatcgataccgaggttgtatttgcaaacctc
accgattcttccggaattaagcttcgacatacgatcctggatgccgcagcgacggttatt
agccagtccgaagcccttattcagccggagtccggctcgaccgcagccttcaaccaggtg
cttgcggttcagcagccgaggctttgggatctagacgagccgagcctctacaagctccaa
acggaattaatcgtcgaaggtaacgtattggattcggaagagcaaaacttcggcttccgc
accttcgatttcgataccgagaaaggcttcttcctgaatggccggcctgtcaagcttcaa
ggggtttgtcagcatcatgacctcggttctcttggcgctgccgtcaacaagacggccctg
agaagacaaatagccctcctacaggaaatgggcgttaacgcgatccggacagcccacaat
atgccggcggtcgagctgatggaattggccgatgagatgggcgtgcttatcgtctccgaa
gcgtacgacatgtgggaacgggcgaagacgccgtacgactttgcgagattttacaaggac
tggtggaaaaaagatatcgccagctgggtccgcagagaccggaaccatccaagcatgctg
atgtggagtatcggcaatgaaatctacgatacccatgccgacgaacgcggacagacgctg
acggtagaacttcgggacaaagtgcatttccatgatccgaagggcaatgccgttgtcaca
atcggttcaaactatatgccttgggagaatgctcagaaatgcgccgatctggttcaattc
gccggctataattacggggacaaatattataagcagcatcatgaggagcatccggactgg
tatatttacggcagcgagacctgctcgacggtacaaagccggggtatctatcacttcccg
ctcgcccagtccgttctggcggacgacgacgagcaatgctcctcgcttggcaacagctct
actagctggggagcaaaaagcacggaagcctgcattatcgctgaccgtgatgccgccttc
tccctcgggcaatttctgtggacgggcttcgattacatcggagagccaaccccttaccat
acgaagaactcctatttcggacagatcgatacggccggcttcaagaaggatgccttctat
atttatcaggcggaatggaccgattatcgcgtgaagccaatggttcatattttcccctac
tgggatttctcggaaggacagctgatcgatgtacgcgtctcttcgaatgcgccgaagatc
gagcttttcttcaacgataattcccttggaacgtatgacatcgatcatgtccacggccag
aagctgctcggagaatggcagattccttatacaaaaggtatccttcgggctgttgcttat
gacgagtcgggcaatgtgattgcaactgacattcaatcctccttcggtgacgcggaaacc
gtcctgctgacaccggacaaaacagcgatagccgcagacggctcggatctggtctttatc
gagatctctgctctcgaccggaataacttgccggtagccaatgccaataaccgtattcac
gtgaccgtagaagggcccggccgactcgttgggctcgataacggggacagcgccgattat
gattcttacaaaggaacgaaccgccgcatgttcagcggcaagcttctggcagtcattgcg
cctacgctggagagcggaaccattaccgttcgtgcagtatccaacgggttggctgccggt
gaagtgacgctgacggctgttgctcctgaaccatcaacaccgggtaatgaaaatactctg
tatgcctatgcacctggacaagctgcggagacttcaagcggatcagccgcttccgacgat
gagattcccgtgcgcaagctggaaattatttgtccgcaaggaaatgcgctttcggcggag
aaccgggctttgccggtacaagttgttattcatccaagtcaagctacgtatcgggatgtt
gaatggcgggtcacgaacgctgccggtgttgatgccaatattgcaacccttgaggcagac
ggccatcatgctgccgttaatgccctaagcgacggcgaattctatatccgctgcgcaaca
aagaacggagcggacaatatccgcctttattctttaatggagttccggaccgacggtgtc
ggacaagcttttattaatccgtatgaattcgtatccgcaggctaccatagcgaatcgagc
cgcaatctgacgaacgggaatgaacgcggcgtagcgacaagccgggacggcgaaagctgg
atttgctttgacaacatcgacttcggcagctatggtgcggacgagattacgctgccgatc
ttctcgctggacagcgaacggttcactatcgatctatgggaaggtattcctggcgagcct
tcggcttccctgcttgcccagatcacgtatcaaaagccgaccaaatggaatgtgtaccag
gaagagacgtatcgtttgccccgccggcttacaggcattacgtccctcagctttgttctg
cagcgcaagattcacctgagtggcttccagtacaagaaagcgatcaaagcatttgaacgt
ctggaggcgctggaaaacaaccagatttacggagatacttatacgctgacggatcagacg
atcgagaacattggcaacaacgtctcgctggtgttccgggacatggactttggggataca
ggcacaagcaagcttgcgatctgcggtcaatcgcctatcgacaacaatacgattcatatc
ctgttcagcggtgctgacggcgagaccaaacagctggtggagtttgcgtacacggaagat
tattgcgagaaagaatacgctcttgagaggatcaccggccttcagacggtcactttcatg
ttcctgccaggcagtcaattcaacttcaaatcgttccaatttctcccggagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PJD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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