KEGG   Paenibacillus sp. JDR-2: Pjdr2_2633Help
Entry
Pjdr2_2633        CDS       T00977                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pjd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pjdr2_2633
Enzymes [BR:pjd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pjdr2_2633
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pjdr2_2633
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3052712..3053527
Genome map
AA seq 271 aa AA seqDB search
MPELPEMEHYRLRLSELIIGSPITGTEVTRDKSINISAEQFEAELVGRTIWFVERRGKHL
LFHLDNGKRLVLHLMLGGTLFFGSEEERPDRTVQVTIRFATGNLYFIGLRLGYLHFMSVK
EADAKLSELGPDPFDKRLTLERFKARFNKKRGALKTALVDQHVLSGIGNCYADEIAFAAK
IRPDAKIPSLTDETWERVYESMHSVLKEAISKGGYMEQPLTAGDAITGGYNDHCQVYDRG
GEPCFVCGTAIEQFEISSRKAFVCPVCQKEQ
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactaccggaaatggaacattaccgattacgattatcggagctgattatcggc
tcgccgattacgggaacggaagttacccgagataaatcgattaacattagcgccgagcag
ttcgaagcggaattggttggccggacgatatggtttgtggaacgcagaggcaaacatctg
ttattccacctcgataacggcaaacgtctcgtgctccatctgatgcttggaggcacgttg
tttttcggcagcgaagaagagcgtcctgaccgcacggttcaggtaacgatccgttttgcg
actggcaatttgtattttatcggtctgcggctcggttacctgcattttatgtccgtaaag
gaagcggatgcgaagctctctgagcttgggccggatccattcgataaaagattgacgctt
gagcgctttaaagcacgcttcaacaagaagagaggcgcgctcaaaacagcacttgtagac
cagcatgtgttgtccggaatcggcaattgctatgcggacgagattgctttcgcggcaaaa
atccgtcccgatgcaaaaattccttccttgacagacgaaacatgggaacgagtctatgaa
tccatgcatagtgtgttaaaggaagcgatttcaaagggtggctacatggagcagccgtta
acagcaggagatgcaattaccggcggttacaacgatcattgtcaggtgtatgaccgcggg
ggagagccatgctttgtctgcggtaccgctatcgagcagtttgagatctcgtcgcgcaaa
gctttcgtttgcccagtctgccagaaggaacagtag

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