KEGG   Paenibacillus sp. JDR-2: Pjdr2_3488
Entry
Pjdr2_3488        CDS       T00977                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pjd  Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pjd03019]
    Pjdr2_3488
   03009 Ribosome biogenesis [BR:pjd03009]
    Pjdr2_3488
   03036 Chromosome and associated proteins [BR:pjd03036]
    Pjdr2_3488
Enzymes [BR:pjd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Pjdr2_3488
Messenger RNA biogenesis [BR:pjd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Pjdr2_3488
Ribosome biogenesis [BR:pjd03009]
 Eukaryotic type
  90S particles
   RNase
    Pjdr2_3488
 Prokaryotic type
  rRNA processing factors
   Pjdr2_3488
Chromosome and associated proteins [BR:pjd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Pjdr2_3488
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM NTP_transf_4
Other DBs
NCBI-ProteinID: ACT02121
Position
complement(3965117..3965812)
AA seq 231 aa
MKRDSINELQTRLQLRFKQLKLLKQAFTHTSYVNEHKHGTIEHNERLEFLGDAVLQLLVS
EYLFAAYPNRPEGELTRMRASVVCEPSLAQFAERLELGAHIQLGRGEEQLGGRQRPALLA
DLFEAFVGAIFLDAGIERTRAFLETHMFPYIESNDYGLLVKDFKSKLQERAQHKGLGAVE
YRIMEERGPAHDREFVVEVCIGEIPYGNGSGRTKKEAEQRAAAVAWQSLTE
NT seq 696 nt   +upstreamnt  +downstreamnt
atgaagcgtgattccattaacgagctgcagacccgtctgcagcttcgcttcaaacagctg
aagctgctgaagcaggcttttacgcatacttcctatgtcaatgaacacaaacatgggacg
atcgagcataatgaacgcctggaatttctaggtgacgctgttctgcagctgctcgtatcg
gaatacttgtttgcggcgtatccgaaccgtccggaaggtgagctgacccgtatgcgtgca
tctgtcgtttgcgagccttcattggcccaattcgcggagcggctggagcttggcgcccat
attcagcttggcagaggcgaagagcagcttggaggaagacagcgtcccgcgctgctcgcc
gatttgtttgaagcttttgttggagcgatattcctagacgccggcatcgaacggacaaga
gcgtttcttgagacgcatatgttcccgtacattgaatccaatgactacgggctgcttgtg
aaggacttcaagtccaagctgcaggagcgtgcccagcacaaggggctaggcgcggtagaa
taccggattatggaagagcgtggacctgcccatgaccgcgagtttgtcgtcgaggtttgc
atcggcgaaattccttacggaaacggcagcggcagaacgaagaaggaagcggagcagcgt
gctgcggcagttgcttggcaatcgctaacggaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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