KEGG   Paenibacillus sp. JDR-2: Pjdr2_4011
Entry
Pjdr2_4011        CDS       T00977                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
pjd00230  Purine metabolism
pjd00240  Pyrimidine metabolism
pjd01100  Metabolic pathways
pjd01232  Nucleotide metabolism
Module
pjd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pjd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Pjdr2_4011
   00240 Pyrimidine metabolism
    Pjdr2_4011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pjd03400]
    Pjdr2_4011
Enzymes [BR:pjd01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Pjdr2_4011
DNA repair and recombination proteins [BR:pjd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Pjdr2_4011
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ACT02641
Position
complement(4555603..4557657)
AA seq 684 aa
MQRGADGFYQLDKDKEAVAAFMEEVEAKSVKFGSLREKLDYLIENDFYENVYDQYTYEQI
EAVFTLTESSGFQFESYMAISKFYKDYAMKTNDKSKYLEQYPDRVAIVALNLGEGDGAKA
LRIAEAMIEQRLQPATPTFLNAGKSRRGEMVSCFLLEMDDSLNSINYVLGTCMQLSKIGG
GVAVNLSKLRGRGEAIKGVEGAAKGVMPVLKLMEDAFSYADQMGQRKGSGAGYYNIFGWD
IIEFLDCKKINADEKTRIKTLSIGLIIPNKFYELAAKNETLYVFGPHSVHKAYDKHLDDM
DMDVMYEELLANDKVVKKAVMNARDMMTKIASIQLESGYPYIMNKSNANRVHALKDIGQV
KMSNLCTEIFQVQETSTINDYGMDDVIRRDISCNLASLNIVNVMERKKLKESVHVGIEAL
TTVSDVSEIDNAPGVRKANEELHSVGLGAMNLNGFFAKNKIAYESDEAKEFASAFFMMMN
YYSIEKSMEIAKERGASFKDFDRSEYAKGTYFTRYIETDFRPASDSVKELFEGMEIPSPQ
DWADLKEKVQKNGLYHAYRLAIAPTQSISYIQNSTSSVMPIVEHIETRTYANSTTYYPMP
YLAQDNYFYYKSAYNIDQFKLIDLIWEIQQHVDQGISTVLHVNSNVTTRELARFYIYAAQ
KGLKSLYYTRTKRLSVEECTSCAV
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgcaacgaggagcggacggcttctatcaattggataaagataaagaagcggtagccgct
tttatggaggaagtggaagcgaaaagcgtgaaattcggttccctccgcgagaagctggac
tacctcatcgagaatgacttttacgagaatgtatatgaccaatatacatatgagcagatt
gaagcggtgttcacgttgaccgagagcagcggcttccagttcgaatcgtatatggccatc
tcgaaattctacaaagactacgcaatgaagactaacgataaatcgaagtatctggagcaa
tatccggaccgcgtagcaatcgttgccttgaaccttggcgaaggcgacggcgccaaagcg
ctccgcatcgcggaagcgatgatcgagcagcgtctgcagccggctactccaacgttcctg
aacgctggcaaaagccgccgcggcgagatggtatcctgcttcctgcttgagatggacgat
tccttgaactctatcaactacgttcttggcacctgcatgcagctgtcgaagatcggcggc
ggcgtagcggttaacctgtccaagctgcgcggacgcggcgaggcaatcaaaggcgtagaa
ggggctgccaaaggcgttatgccggtactgaagctgatggaggacgcattctcctacgcg
gaccaaatgggtcagcgcaaaggctcaggcgcagggtactacaacattttcggctgggat
atcatcgaattcctggattgtaaaaaaattaacgccgacgagaaaacacggatcaaaaca
ttgtcgatcggcttgatcatacctaataaattctacgagctggctgcaaagaacgaaacg
ctgtacgtctttggccctcattccgttcataaagcatacgacaagcatctcgacgacatg
gatatggacgttatgtacgaagaactgcttgctaacgataaagttgtgaaaaaagcggtc
atgaacgcccgcgacatgatgacaaagatcgcttcgattcagctggagtccggctatcct
tacatcatgaacaaatcaaacgccaaccgagttcacgccttaaaggatatcggtcaagtc
aagatgtccaatctctgtaccgaaattttccaggtgcaagagacttcgacaatcaacgac
tacggcatggacgatgtgatccgccgcgacatcagctgcaacctggcttcgctgaacatc
gttaacgttatggaacgtaaaaagcttaaagaatccgtacacgtcggcatcgaagctttg
actacggtcagcgacgtatccgagatcgacaacgctccgggcgtacgcaaagcaaacgaa
gagcttcattccgttggccttggcgcaatgaatctgaacggctttttcgcgaagaacaag
attgcttacgaaagcgacgaagcgaaagagttcgcgagcgcattctttatgatgatgaac
tactactcgatcgagaaaagcatggaaatcgccaaagaacgcggcgcaagcttcaaggat
ttcgatcgttccgaatacgcaaaaggcacttatttcacccgttatatcgaaacggacttc
cgtccagcatcggatagtgtaaaagaactgttcgaaggcatggaaatcccgtctcctcag
gactgggctgatttgaaagagaaagtgcaaaaaaacggcttgtaccatgcttaccgtctg
gctatcgcgccaacgcaaagcatctcgtacatccaaaactcgacttcgagcgttatgccg
atcgtagagcatatcgagacacgtacttacgcgaactcgacgacgtactatccgatgcct
tacctggctcaagataactacttctactacaaatcggcttacaatatcgatcaattcaag
ctgattgacctgatttgggaaattcagcagcacgtggatcaaggcatctcgaccgtcctt
cacgtaaacagcaacgtaacaacccgcgaattggcgcgcttctacatctatgccgctcag
aaggggctcaaatcgctctactatacgagaacgaagcgtctttccgttgaggaatgcaca
agctgcgccgtataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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