KEGG T00977: Pjdr2

Paenibacillus sp. JDR-2: Pjdr2_4673

Entry

Pjdr2_4673 CDS T00977

Definition

AMP-dependent synthetase and ligase

Orthology

K01895

acetyl-CoA synthetase [EC:6.2.1.1]

Organism

pjd Paenibacillus sp. JDR-2

Pathway

pjd00010	Glycolysis / Gluconeogenesis
pjd00620	Pyruvate metabolism
pjd00640	Propanoate metabolism
pjd00680	Methane metabolism
pjd01100	Metabolic pathways
pjd01110	Biosynthesis of secondary metabolites
pjd01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:pjd00010]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:pjd00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:pjd00640]
Metabolism; Energy metabolism; Methane metabolism [PATH:pjd00680]

SSDB

Motif

Pfam:

AMP-binding AMP-binding_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

5355666..5357243

AA seq 525 aa
MNFDQWIAPEQYNISSEIERHKSDKLALRLLDDQGHTTHITYNDLLNQVNQLAGGLNELG
LAKGDRVLVMVPRTIEAYMIYVACLKLGLVIIPSSEMLRAKDLSYRLQHSEARAVIAWAE
GAAEVDNITEELPELQFRIDASGGQADGWITLGSLMEGQPEEREAEATHRDDMAILAYTS
GTTGNPKGVVHSHGWGYAHLRITAAWLGIQSSDLVWATAAPGWQKWIWTPFLSVLGSGAT
GLIYNGSFSAERYLRIIQENQVQVMCCTPTEYRIMAKTDGLSGYDLSSIRSAVSAGEPLN
QAVIKQFEELFGFIIRDGYGQTENTLLIGNLKDSPIKIGSMGKSIVPGLVEIIDDEGRPQ
PMGEVGSIAVHTDMPALFKSYYKDPDRKGDNIVGSYFITGDRASKDEEGYLWFEGRGDDI
IISSGYTIGPFEVEEALLRHPSVKECAAVASPDEIRGHIVKAFIVLRDGVSGSPELVQEL
QDHVKSVTAPYKYPRKIEFVSELPKTNSGKIRRIELRQREAFLNS

NT seq 1578 nt +upstreamnt +downstreamnt
atgaacttcgatcaatggatcgcacccgaacaatataacatcagctctgagattgagcgc
cacaagtcggacaagcttgcgctccgcttgctggacgatcaggggcataccacgcacatt
acatataacgacctgctgaatcaagtaaaccagctggcgggcggcttgaacgaactaggc
ctggcaaaaggcgatcgcgtcctcgttatggttccaagaaccatcgaagcgtatatgatt
tacgtagcctgcttgaagcttggccttgtcattattccatcctccgaaatgctccgggcg
aaggatctgtcctaccgcctccagcattccgaagcgcgtgcggttatcgcatgggcagaa
ggtgccgctgaagtagacaacattacggaagaactgccagagctgcagttccggattgat
gctagcggcggacaagcggatggttggatcaccctcggctccttaatggaaggacagccg
gaagagcgcgaagccgaggctacccatcgcgatgatatggcgattctcgcttatacgtcg
gggacaaccggcaatccaaaaggcgtcgttcacagccacggctggggctacgcgcatctg
cgcatcaccgctgcatggcttggcatccaaagctccgatctggtctgggcaaccgctgcg
ccaggctggcaaaaatggatctggacgccgttcttatccgtgctgggcagcggcgcaacc
ggcttgatctataacggttcgttcagtgcggaacgttacttgcggatcattcaggaaaac
caggttcaagtgatgtgctgcacgccaaccgaataccgcatcatggcgaagacggatggc
ttatccggttacgacctgtcgtcgatccgcagcgcggtatcggccggcgagccgcttaac
caagccgtgatcaagcagttcgaggagctgttcggcttcatcatccgcgacggctacggc
cagacggaaaatacgctgctgatcggcaatctgaaggattcgcctattaagattggctcc
atgggcaagtctatcgttccgggtctcgtcgagattattgatgacgaaggccgtccgcag
ccgatgggagaggtcggcagcattgccgttcataccgatatgcctgccctgttcaagtca
tattacaaggatcccgatcgcaaaggcgacaacattgttggttcgtacttcatcaccggc
gaccgcgcaagcaaggatgaggaaggttatctctggttcgaaggccgcggggacgatatc
attatcagctccggctatacgattggaccctttgaggtcgaagaagccttgctccgccat
ccatctgttaaagaatgtgcagccgtcgcaagcccggacgaaatccgcggccatatcgtg
aaggcttttatcgtcctgagggacggcgtctccggttccccggagctggtccaagagctg
caggatcacgtcaaatccgtaacggcgccttacaaatatccgcgtaaaatcgaattcgta
agcgagctgccgaaaaccaactccggtaaaatccgccggatcgagcttcgccaacgcgag
gcgtttctgaactcttaa

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PJD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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