KEGG T01094: PKH

Plasmodium knowlesi: PKH_140260

Entry

PKH_140260 CDS T01094

Definition

DNA ligase 1 (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

pkn Plasmodium knowlesi

Pathway

pkn03030	DNA replication
pkn03410	Base excision repair
pkn03420	Nucleotide excision repair
pkn03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:pkn03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:pkn03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pkn03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pkn03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

NCBI-GeneID:

GeneDB:

UniProt:

Position

14:complement(join(133770..136329,136694..136908))

AA seq 924 aa
MCIGSYANMKLLVLFLIARMLLCKVYSCMRREYSYIIPFMQKNKFYRRKTNFNVKVFTNF
RDSASNRRSGFLKCLSFPKKTMEGKNEETDIKEESKVKEEGKESTKRKIASDGNTKTKKA
KAKSENDVKKGSLFNCTVKEDDKVSDLTSPKFNPVHFDVSNLYLSQKDKEKHKFKDSLLF
TFLTNTFNQIEELKGSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYLN
VEAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAESCSCKMRTIFPLPRLTIQSV
FNELKSIPNLSGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQALS
YAFILTRPFIPEEIVQKGKLMNEQLLSVKGSGSGEEDDNVSDSTMENEMNKVNKKKGGML
NVAKQTGESPSHVKKENEKENQSVKDEFDMNALIESIKMRNEKISKPNLFYDIGKEGDTR
LLPIFKELKKSYCEINNDSDIFECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCT
VKAGLPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLET
MTEKYPDVIQIVRDQIISGATECIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKV
KICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKEGVLCYATHSEMNNVEDMDIFLQD
AIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSG
VYGAFVLATYNSETENFQTVCKAGTGFSDEILGSLYDTLSDKIIPSKKSYYEVSDKLNPD
VWFDAHYVWEVKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQI
VDLYEAQFTYNKNKNDFNEESESE

NT seq 2775 nt +upstreamnt +downstreamnt
atgtgtataggcagctatgctaacatgaaattgctcgtgctatttctcatagcgagaatg
cttttgtgcaaagtttacagttgcatgagaagagaatactcttatataataccctttatg
caaaagaataaattctacagacgaaaaacaaacttcaacgtgaaagttttcactaacttt
agagacagtgcatcgaatagacgtagcggttttttgaaatgcctgtcctttccgaagaaa
accatggaggggaagaatgaagaaacggatattaaggaggaatctaaagtaaaggaagaa
gggaaggaatcaaccaagagaaaaatagcaagtgatggaaacacaaaaacgaaaaaggcc
aaggcgaagagcgaaaatgatgtaaagaaagggtccctatttaactgcaccgttaaggaa
gatgacaaagtgagcgatttaacatcacccaaatttaaccccgtacattttgatgtaagt
aatttatacctttcgcaaaaggataaggaaaaacacaagtttaaggattctttattattc
acttttttgacaaatacatttaatcaaatagaggaattaaagggaagtggaactggtagt
aaaaagaacgtagcaattattctgtccaatgtgtttagagttttaatatactacagtcct
aacgacttaattccagcggtatatataacgctaaacaaagtagctcctgattatttaaat
gtcgaggcaggcgtaggagaagctctcattttgaaaaccatgtctgaagcgtatagtaga
actgaatcaagcataaaaaaggatttacaacaaattgaggatcttggcataatagcagaa
agttgttcttgcaagatgaggaccattttccctttgcctcgtttgactatccagtcagta
tttaatgaacttaagagcataccaaatttgagtggttcaaactctcagcagaaaaagaga
gaggtaattaagaagctattggtgagcgcgaaaactagtgaagcgaaatatattgttcgt
tttttacaacagcgattgagaataggggtgaacagcgctactgtgttgcaggcactgtcc
tatgcatttattttaacgcgcccgttcattccggaagaaattgtgcaaaaggggaaattg
atgaacgagcaactgctaagcgtgaagggaagtggcagtggggaggaagatgacaatgtt
agcgacagtactatggagaatgaaatgaataaggtgaataagaaaaagggaggaatgctc
aatgtggccaagcaaactggggagagcccttctcacgtaaaaaaggaaaacgaaaaggaa
aatcagagcgtaaaggacgagttcgacatgaacgcgctaatcgagtccatcaaaatgagg
aacgaaaaaataagcaagccaaatttgttctacgacatagggaaggaaggagacacccgt
ttattacccatatttaaggagttaaaaaaaagctactgcgaaataaataacgattcggac
atttttgagtgcatggaaaaatcagtgaagagcgccctgtgtgagttaccaaatatcgaa
attatcattcagaatttgttaaatggagatgacatgaatacgttaagcaagaagtgcaca
gtgaaggctgggctacccgtgcaacctatgctagccaagccaacgaaaggtatacaggaa
gtacttgaccggttcaataatgtgacatttacgtgtgaatataaatatgacggagaaagg
gctcaaatacattacatagataaggataatataaaaatttttagccgaaatttagaaacc
atgacagagaagtatccagatgtcattcaaatagtgcgggatcaaattatcagcggtgct
accgagtgcattattgacagtgaagttgtagcttatgatatagagaataaaaaaatatta
ccatttcaagttctgaccacaagaaagagaaaagatgtggacatcgaaaatataaaggtg
aaaatatgtctattcccatttgacctcatctgttgtaatggcgtcccagttattaaagag
ccactagaaattaggagaaaactcctctactcattactgaaatgtaaggaaggagttttg
tgttatgcaacacactccgaaatgaacaatgtagaagacatggatatatttttgcaagat
gcaattgaaaataattgtgaaggactaatggtcaagaccttactggataatgcatcctac
gaaccatcaagaagatcgttaaattggttgaaggtgaaaaaggattatatagaagggtta
tctgattcggtagatttagtacccatagcgggttattatggaaaaggaaaaagaagtgga
gtgtatggtgcatttgttttagctacatataattcagaaactgaaaatttccagactgta
tgtaaagcaggcaccggttttagtgatgaaattcttggatcattatacgacactttaagt
gataaaattataccaagcaagaaatcatattacgaagtttctgataaattaaatcctgat
gtctggtttgatgcacactatgtatgggaggtaaaagcggctgacctctctctctctcct
gtgcatactgcagccatcggagtttattcggatgacaagggaattggcttgcgtttcccc
aggtttctgaggctcagggaggataagaatgcggagcaggccaccacatcacaacagatt
gttgacctatacgaggcacaattcacttacaacaaaaataaaaacgacttcaatgaggag
agtgaaagtgaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   GENEDB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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