KEGG   Pontibacter korlensis: PKOR_08015
Entry
PKOR_08015        CDS       T03841                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
pko  Pontibacter korlensis
Pathway
pko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PKOR_08015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pko03019]
    PKOR_08015
Messenger RNA biogenesis [BR:pko03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PKOR_08015
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_22 ERCC3_RAD25_C Germane
Other DBs
NCBI-ProteinID: AKD03076
UniProt: A0A0E3UWW7
Position
1872566..1873831
AA seq 421 aa
MKFEDYRISDEIKKSLSKLGFKKPTDIQFKAIPPIMRGEDVLAIAQTGTGKTAAFAIPVL
DRLQFSKNRKRGDGIKCVVMVPTRELALQITEVFNEIGRGTRVETFCVFGGVEQGPQIAK
LENGIDVLVATPGRLFDLVSQGHLHLHRVEMLVLDEADHMLDLGFIHDIRQLIAKLPRKR
QTLFFSATINEKIKELAYSLVNKPVRIQISPKDPVSKNVDHSVMFVEMDDKRFFLERVVK
ENPDKKILAFVRTKVRAERVVAAMERVGIQAISIHGGKEQKDRLDVMRKFKKGEVKLLIA
TDVSARGIDIPNVEYVVNYDLPEQPENYVHRVGRTGRGTEKGIAVSLCALEERPMLEEIQ
KYLTKDIKVLEVDKEDYEATLDFSADASYDWKSLMKEAEETDAKVKAAKSKKAKAKAKKK
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagtttgaagattaccgcatatctgacgaaataaagaagagccttagcaagctgggc
tttaaaaagccaactgatatccagttcaaagccattccgccaatcatgagaggagaggac
gtgttggccatagcacagaccggaaccggtaaaacagccgctttcgctatacctgtgctc
gataggctgcagtttagcaaaaaccgcaagcgaggtgatggaatcaaatgtgtggtaatg
gtgcctacccgtgagctggcgctgcagataacagaggtattcaatgagatcggacgtggc
acgcgtgtagagacgttctgcgtgtttggtggtgtggagcaagggccgcaaatagcgaag
ctggagaatggcatagatgtgcttgtagccacgccaggccgccttttcgacttggtaagc
caggggcacctacatctgcaccgcgtggagatgctggtgctggatgaagccgatcatatg
ctggacttaggttttattcacgacatccgccagctgattgccaagctaccacgtaagcgc
cagacactgttcttctcggctactattaacgaaaagataaaagagctggcttactcgttg
gtgaacaagccagtgagaatacagatttctccaaaagaccctgtatctaaaaatgtggac
cactcggtgatgtttgtagagatggatgataagcgcttttttctggagcgggtagtaaag
gagaatcctgacaagaagatattagcctttgtgcgcacgaaggtgcgtgccgagcgtgta
gtggcagccatggaacgtgtaggcatacaggccataagtatacacggaggcaaagagcag
aaggaccgcctcgatgtaatgcgtaagtttaagaaaggggaggtgaagctgctgattgct
accgatgtgagtgcccgcggcattgatatccctaatgtagagtacgtagttaattacgac
ctgccagagcagccggagaattacgtgcaccgcgtaggccgtactggccgtggtactgaa
aaaggtatagctgttagcttatgtgccctagaagaaaggccgatgcttgaagagattcaa
aagtatctaaccaaagacattaaagtcttagaggtagataaggaggactacgaagctacc
ctcgatttcagcgctgatgccagttatgactggaaatctttaatgaaagaagcagaggag
accgacgcgaaggttaaagccgccaagagcaagaaagcaaaagcaaaagctaaaaagaaa
aaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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