KEGG   Pseudomonas koreensis: AYO71_00625
Entry
AYO71_00625       CDS       T04647                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pkr  Pseudomonas koreensis
Pathway
pkr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AYO71_00625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkr02044]
    AYO71_00625
Secretion system [BR:pkr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AYO71_00625
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 DUF2345 DUF6296
Other DBs
NCBI-ProteinID: AMT86101
Position
complement(146337..148361)
AA seq 674 aa
MFGKGHCAPFSLHIPAIRHDFKVLAFTGTEAISQLYAFRIELVSEYADFDLESLLSQPAF
LQFGLAGEGIHGRIENVMLGESGKRLTRYELSLVPALHYLQMSHDQRIFQQLTVAQIIAQ
VLKGHGIQADDFTFNVAAGEPREYCTQYGESDFLFIQRLCAEEGIAWHHQHSLDRHLLVF
SDSPVFARKLGTTPFRVDSGMVAEHPVVNHLSMGFNTRTSTVTRRDYDLKRPSLLLESRF
TAEFTPALEDYRYPLLIKSEKHGKQLVRQALERHRSDYQWIEGKSNQAILRSGHLFKLSE
HPRADCNELWLLVSLSHEGKQPAVLEEAFSSEAKPADGFSQGYRNTFRAIPAEVVYRPPL
PAPRPLLVCQTARVTGPPGEEIFCDEYGRVRVEFPWDRAERNSEKSSCWLRVASSWAGDG
FGAVTIPRVDMEVVVTFQEGDPDQPLITGCVANKVNAVAHPLPASKTRTVLRSQSSPRNG
GYNELSIEDRAGQEKICLRAQRDLEQLILNDSRSLITRDRHEHVGNDSTSLIEGRDSRTH
QGLRSTVINADDLLQVSGTSSQTLGALVIQAGQQAHVTASNVVIDAGMSLTLSAGGHHIV
INAGGIFSSVPIVQGGAPLPGLAPLQPLQAEAGLVLPNSATPLSIVNSARQQAADFCPLC
EACAAGQCELGEVA
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgttcggcaaaggccactgcgcgccattctcactgcatatcccggccattcgtcacgac
ttcaaggtgctcgcgttcactggcaccgaagcgatcagtcagctgtacgcatttcgcatc
gagctggtgagcgagtacgcggacttcgatctggaaagcctgctcagccagcctgctttt
ctgcaattcgggttagcgggcgaaggcattcacgggcggatcgaaaatgtcatgctcggc
gaatcgggaaagcgcctgacccgctatgagctgtcactggtaccggcgctgcattatctg
caaatgagccacgaccagcggatttttcagcaactgacagtggcgcagatcatcgcgcaa
gtgctcaaagggcatggcatccaggccgatgacttcacgttcaatgtcgccgccggtgag
cctcgtgagtactgcacgcaatacggcgaaagcgacttcctgttcatccagcgcctgtgc
gccgaagagggtattgcctggcaccaccagcattcgctcgacaggcacttgctggtgttc
agcgacagcccggtgttcgcgcgcaaattgggtaccacacccttcagggtcgatagcggc
atggtcgccgaacacccggtggtcaaccacctgagcatgggcttcaacacccgtaccagc
acggtcacccgccgcgactatgacctcaagcgcccaagcctgctactggaaagccgcttc
accgcagaattcacgccggctctggaggactatcgctatccactgctgatcaagtccgag
aagcacggcaaacagctggtgcgtcaggcattggagcgccatcgcagcgactatcaatgg
attgaaggcaaaagcaatcaggcgattttgcgcagcggtcacctgttcaagctgagcgaa
catcccagggccgactgcaacgagttgtggctgttggtcagtcttagtcacgaaggcaag
caaccggcagtgctcgaagaggctttcagcagcgaggcgaaacctgccgatggtttttcc
cagggctatcgcaataccttcagggccattcccgcagaggtggtttaccgcccgcctttg
cccgcgccaaggcccttgctggtctgccagaccgcgcgcgttaccgggcctcccggagag
gagatcttctgtgatgaatacggcagggttcgtgtcgagtttccctgggatcgcgctgaa
cgcaacagcgaaaaaagcagctgctggttacgcgtagcgtccagttgggcaggtgacgga
ttcggtgcggtgaccattccccgggtcgacatggaagtggtcgtgaccttccaggaaggc
gacccggaccaaccgctgattaccggctgcgtcgccaacaaggtcaatgccgtcgctcat
cccttgccggcgagtaaaacccgcacggtattacgcagccagagttcgccgcgcaatggc
ggctacaacgagctgtcgatcgaggatcgcgccgggcaggagaaaatctgcctgcgcgcg
cagcgcgacctcgagcaactgatcctcaacgacagccgcagcctgatcactcgcgaccgc
catgagcatgtcggcaatgacagcaccagccttatcgaaggcagggattcgcgcactcat
caagggctgcgcagcaccgtgatcaacgccgatgacttgttgcaggtcagcggcaccagc
agccagaccctgggcgctctggtgatccaggccggccagcaggcgcatgtcacggcaagc
aacgtggtgatcgatgccggcatgagcctgacgctgtcagcgggcggccatcacatcgtg
atcaatgccggcgggattttcagcagcgtgcccatcgttcagggcggcgcgccactgccg
gggctcgcaccgctacaaccgctacaggcagaggctggcctagttcttccgaacagcgcc
acaccgctgtcgatcgtcaacagcgcccgccagcaggcagcggatttttgcccgctgtgc
gaagcctgcgcggcgggtcagtgcgagctgggagaagtcgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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