KEGG   Planococcus kocurii: AUO94_16500
Entry
AUO94_16500       CDS       T04200                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pku  Planococcus kocurii
Pathway
pku03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pku00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AUO94_16500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pku03021]
    AUO94_16500
   03400 DNA repair and recombination proteins [BR:pku03400]
    AUO94_16500
Enzymes [BR:pku01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AUO94_16500
Transcription machinery [BR:pku03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AUO94_16500
DNA repair and recombination proteins [BR:pku03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AUO94_16500
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ALS80117
Position
complement(1640971..1644525)
AA seq 1184 aa
MVGQLVQYGQHRQRRSFSRISEVLDLPNLIEIQSSSYEWFLEEGLREMFRDISPIEDFTG
NLSLEFVDYSLAEPKYPVDESKERDVTYAAPLRVKVRLHNKETDEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFHDKTDKNGKKGFGATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLLGDNEFLQNTLEKDNTESTEKALLEIYERL
RPGEPPTVESAKSLLYSRFFDPKRYDLANVGRYKMNKKLHIKNRLFNQTIAETLADPETG
EILVEAGTLIDRRVLDRLIPNLENGVGFHTVSQVGGVLEGEVTLQSIKIYAPNNEDQKEI
TVISNAYIEDKIKNVTPADIISSISYFFNLLYGVGNTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSINDTQAIVPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINTLSTFAKVNKFG
FIETPYRRVDGETGLVTQHIDYLTADEEDNYVVAQANSKLNDDGSFVEEGIVARFRGENT
IYKRGSIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPFVGTG
MEHLAARDSGAAVVAKNDGIVEFVEAKEISVRRIEVVDGNEVKGDLDVYRLQKFVRSNQG
TSYNQRPIVKVGDRISKRDILADGPSMERGEMALGRNVLVAFMTWDGFNYEDAIIMSERL
VKDDVYTSVHIEEYESDSRDTKLGPEEITRDIPNVGEDALRNLDDRGIIRVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNREDGDEL
PPGVNQLVRAYIVQKRKISVGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMASRSLGIHMASSVFDGANEEDVLETMEESGMPLDGKTILYDGR
SGEAFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGESVPEPSVPESFKVLIKELQSLGMD
VKMLTIDDEEIELRDLDEEEDLQPADSLNILPIADKEAPVGTID
NT seq 3555 nt   +upstreamnt  +downstreamnt
ttggtaggtcaactagttcagtacggtcaacatcgtcaacgcagaagtttttcgagaatc
agtgaagtgctggatcttccgaacttgatcgaaattcaatcatcatcttatgaatggttt
ctcgaagaagggcttcgcgaaatgttccgagatatttcaccgattgaagatttcacaggg
aatctatcactcgagtttgttgattacagtctcgcggaaccgaagtatccagtcgatgaa
tcgaaagagcgcgacgttacttacgcagcacctttgcgtgttaaagtgcgtctgcacaac
aaagaaacagatgaagtaaaagagcaggatgtcttcatgggagatttcccattaatgaca
gaaacgggtactttcgtcatcaatggcgcagaacgcgttatcgtttcccagttagttcgt
tcgccaagtgtttatttccacgacaagacagataaaaatggtaaaaaaggctttggagca
actgttatacctaaccgtggagcatggttggagtacgaaacagatgcgaaagatgtcgtg
tatgtcagaattgatcgtacacgtaaattgccagtaacagttcttttaagagctcttgga
tttggatcagaccaagaaatcattgatttgcttggagataacgaattccttcaaaacaca
cttgaaaaagataatacagagagcacagaaaaggcgcttcttgaaatttatgaacgcttg
cgccctggtgagccaccaacggttgaaagtgcgaagagcttactatattcacgctttttc
gacccaaaacgctatgacttagcaaatgttggtcgctacaaaatgaacaaaaagctccat
attaaaaaccgtcttttcaaccaaacaattgccgaaacattggcagatcctgaaacaggt
gaaattttagttgaagcagggacattaattgatcgtcgtgtactggatcgtttaattcca
aacttagaaaacggtgttggtttccatacggtttctcaagtaggtggcgttctagaaggt
gaagttactttacagtcgattaaaatttatgcgccgaacaacgaagatcaaaaagaaatc
actgtgattagtaatgcttatatagaagataagattaaaaatgtaacgccagcggatatt
atttcttctattagttacttctttaaccttctttacggtgttggaaacacagatgacatt
gatcatcttggtaaccgccgtttgcgttcagtaggtgagcttttacaaaaccaattccgt
attggtttgtctcgtatggagcgcgtcgtacgtgagcgtatgtcgattaacgatacacaa
gccatcgtacctcaacaattgatcaatatccgcccggttattgcatcaattaaagagttc
ttcggtagttctcagctttctcagtttatggatcaaacgaatccacttgctgaattgaca
cacaaacgccgtctatcggctcttgggcccggtggtttaacgcgtgaacgtgcaggtttt
gaagtgcgtgacgttcactattcacattatggccgtatgtgtccaattgaaacccctgag
ggcccgaacattggattgatcaatacactttcaacatttgcgaaagtgaataagttcggt
ttcattgaaactccttatcgtcgtgtagatggtgaaactggcttagttacacagcatatt
gattacttgactgcggatgaagaagataactatgtagtcgctcaagccaactcgaaatta
aatgacgatggatcatttgttgaagaaggcattgtggcacgtttccgcggggaaaacaca
atttacaaacgcggcagcattgactatatggatgtttctccgaagcaggtcgtttccgta
gcaacagcttgtattccgttcctagaaaacgatgactccaaccgagcattaatgggagcg
aacatgcaacgtcaagcagttcctttgttaaatccggaagctccttttgtaggaactgga
atggaacatttggcggcacgtgattctggtgcagctgtggtggcaaaaaatgacggtatt
gtagagtttgtggaagcaaaagaaatttcagttcgccgcatcgaagttgtggatggcaat
gaagttaagggtgacttggatgtctacagattgcagaaattcgttcgttcgaaccaaggg
acaagttataaccaacgcccaatcgttaaagttggagaccgtatttctaaacgtgatatt
ctagccgatggaccttcaatggagcgcggagagatggcattgggaagaaacgtactggta
gccttcatgacgtgggacggctttaactacgaagatgcgatcatcatgagtgaacgttta
gtgaaagacgatgtttacacatctgtccacatagaagagtacgaatctgattcacgtgat
acaaaacttgggccagaagaaattacgcgcgatattccgaacgtaggggaagatgcatta
cgtaacttggatgaccgtggaattatccgtgtcggagctgaagtaaaagatggagatatt
ctagttggtaaagtaacacctaaaggcgttactgaattaactgctgaagaacgtcttctt
catgctatttttggtgaaaaagcacgcgaagttcgcgatacatcgttgcgagttcctcac
ggtgctggcggtattgtattagacgttaaaatcttcaaccgtgaagatggagatgagtta
ccaccgggtgttaatcagctagtccgcgcatacatcgttcagaaacgtaaaatttctgtg
ggtgataaaatggccggtcgtcacggaaacaaaggtgttatttcaaggattttacctgaa
gaagatatgccattcatgcctgatggcacgccagtcgacattatgttgaacccactgggt
gtaccgtctcgtatgaatatcggtcaggtgcttgaattgcatcttggaatggcttctcgt
tcacttggaattcatatggcttcatctgtatttgatggagcgaatgaagaagatgtgttg
gaaacaatggaagagtcaggtatgccacttgatggtaagacgattctctatgatggccgt
tctggggaagcgttcgataaccgtgtgtctgtagggatcatgtacatgatcaaacttgct
cacatggttgacgataaattgcatgcccgttcaactggaccttactcattggttactcaa
caaccactgggtggtaaagcacaattcggtggacagcgttttggtgagatggaagtatgg
gcactagaagcatatggtgctgcacatacattacaagaaatcttaacagtcaagtcggat
gatgttgtaggtcgtgtgaaaacgtatgaagcaattgttaagggcgaaagtgtaccggaa
ccaagtgtaccggaatcatttaaagttctaatcaaagagcttcaaagtttaggtatggac
gttaagatgttgacgattgatgatgaagaaattgaattacgcgatttggatgaagaagaa
gatcttcagcctgcggattcattaaatatcctaccaatcgcagataaagaagcaccggtt
ggaacaattgattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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