KEGG T00580: Plav

Parvibaculum lavamentivorans: Plav_0783

Entry

Plav_0783         CDS       T00580

Name

(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

pla Parvibaculum lavamentivorans

Brite

KEGG Orthology (KO) [BR:pla00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pla03009]
    Plav_0783
Enzymes [BR:pla01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Plav_0783
Ribosome biogenesis [BR:pla03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Plav_0783

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Cons_hypoth95 Met_10 Methyltransf_25 MTS

Other DBs

NCBI-ProteinID:

ABS62406

UniProt:

A7HR73

Position

849122..850369

AA seq 415 aa
MTAEIEIVIETLGAQADGVAQTPQGPLYVPYVLPQERVLVRPAGDGRAELRRVLDASADR
IAPACPHFTFCGGCSLQHMEAARYADWKWAQVATALRARGIEAEIAPLVPARPRSRRRAT
FAATRTKKTLAIGYYAQASHTIVPIAECPLVVPEIERALPALAGLVAPGLSRTSRASVLV
TSTASGLDVAVTGGKPLDGPLRLELAARASAADIARLSWGGEIVAGRRPPFVDLSGLAVL
PPPGAFLQPTREGEAALVRLVAQGVGKSVRIADLFAGCGTFSASLARSATVHAVEGESAS
LAALARAVREQGPSLGLKPVTHETRDLARRPLLRSELDSFDAVVFDPPRAGAAAQAEEIA
RSEVPVVAAVSCNPATFARDARTLLDGGYALSELTPVDQFLWSPHIELVGIFRKG

NT seq 1248 nt +upstreamnt +downstreamnt
atgaccgctgaaatcgagatcgtgatcgaaacgctcggtgcgcaggcggatggcgtcgcg
cagacgccgcaaggcccgctctatgtgccctatgtgctgccgcaagagcgcgtgctcgtg
cggcctgccggcgatggccgcgcggagcttcggcgggtgctcgatgcatccgctgaccgc
atcgcgcccgcctgtccgcatttcaccttctgtggcggctgctcgcttcagcatatggag
gcggcgcgatatgcggactggaagtgggcacaagtcgccaccgccctgcgcgcaaggggc
atcgaggcggaaatcgcgccacttgtccccgcccggcctcgcagccgccgtcgcgcgacc
ttcgccgcgacgcgaacgaagaagaccttggccatcggctactacgcgcaagccagccac
acaattgtgccgatcgcggaatgtccgctggtcgtgccggagatcgagcgtgccttgccg
gctcttgccggtctcgtcgcgccgggcctctcccgcacgtcgcgcgcctctgttctggta
acctccacagcgagcggtctcgacgtcgccgtcacaggcggcaagccgctcgacggaccg
ctgcgtctcgaactcgccgcgcgggcatccgctgccgatatcgcccgcctgtcatggggc
ggtgaaatagtcgccgggcggcgtccgccttttgttgacctgtcgggccttgcggtcctg
ccgccgcctggcgctttcctccagccgacgcgcgaaggcgaagcggcacttgtccggctt
gtcgctcaaggggtgggtaagtccgtccgcatcgccgatctctttgccggctgcggcacg
ttctcggcctctctcgcccgtagtgccaccgttcatgccgtcgaaggcgagagcgcatcg
ctcgccgcgctcgcgcgggcggtccgtgagcaggggccgtcactcggtctgaagcccgtc
acccacgaaacccgcgacctggcgcgccgtcccctgctgcgctcggaactcgatagtttt
gatgcggtggttttcgatccgcctcgcgccggcgcggcggcgcaggccgaggaaatcgct
cgttctgaagtccctgtcgttgccgccgtttcttgcaatccggcgacattcgcccgcgat
gcaagaacgcttctcgacggaggctatgcactatcggagctcacgcccgtggaccagttt
ctctggtcgcctcacatcgagctcgtggggatattcaggaagggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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