KEGG P.lavamentivorans: Plav

Parvibaculum lavamentivorans: Plav_1104

Entry

Plav_1104 CDS P.lavamentivorans

Definition glutamyl-tRNA synthetase

Orthology K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]

Pathway pla00860 Porphyrin and chlorophyll metabolism
pla00970 Aminoacyl-tRNA biosynthesis
pla01100 Metabolic pathways

Class Metabolism; Metabolism of Cofactors and Vitamins; Porphyrin and
chlorophyll metabolism [PATH:pla00860]
Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:pla00970]

SSDB

Motif Pfam: tRNA-synt_1c tRNA-synt_1f
PROSITE: AA_TRNA_LIGASE_I

Other DBs NCBI-GI: 154251558
NCBI-GeneID: 5455819
JGI: Plav1104
UniProt: A7HS42

Position 1212856..1214205

AA seq 449 aa
MSGAPVVRFAPSPTGSLHVGNARAALFNFLFARKNSGKFMLRMDDTDDERSTVEFAAGIE
EDLTWLGLRHDLFARQSDRLAAYEAAAAKLKADGRLYPAYETAAELDRKRKRQMARGLPP
VYDRAALALTDEDRAKLEAEGRKPHWRFRLDRVHTAFDDLVQGAVEVDGASLSDPVLIRE
DGRFLYTLPSVVDDIDFAVTHVIRGSDHITNTGVQIQIIRALGAEPPVYAHYSLLNGPEG
KPLSKRDDAARFSLRALRDAGFEPMALNSLLARLGTPDAVEPCLSLDELAARFDISRLGR
ADIRFDPADLAKVNTACLHLMSYEEAKPRLAALGCDLGEAFWEAIKPNLILFSDAADWAR
VVEGPVEPVIENPDFAAAAAAALPPEPWDESTWALWTDAVKQATGAKGKALFMPLRLALT
GLTHGPELKNLLPLIGRERASARLGGLTR

NT seq 1350 nt +upstreamnt +downstreamnt
gtgagcggcgccccggtcgtccgcttcgcgccgtcgcccaccggcagcctccatgtcggc
aatgcccgtgccgcgctgttcaacttcctctttgcacggaagaattcgggcaagttcatg
ctccgcatggacgacaccgacgacgaacgctcgacagtggaattcgccgcgggcatcgag
gaagatctcacctggcttggcttgcgccacgacctcttcgcccgccagtcggaccgcctc
gccgcttacgaagccgccgccgcaaagctgaaagccgatggccgcctctaccccgcctac
gaaaccgccgctgagctcgaccgcaagcgcaagcgccagatggcgcgcggcctgccgccg
gtctatgaccgcgccgccctcgccctcaccgatgaagaccgcgcgaagctcgaagccgaa
ggccgcaagccccattggcgcttccggctcgaccgcgtccacaccgctttcgacgatctc
gtgcaaggcgccgtcgaggtcgacggcgcctcgctgtccgatcccgtgctcatccgcgag
gatggccgcttcctctacaccctgcccagcgtcgtcgacgacatcgacttcgccgtcacc
catgtcatccgtggctccgaccacatcaccaacaccggcgtgcagatccagatcatccgc
gccctcggcgccgagccgccggtctatgcgcattactcgctgctgaatggcccggagggg
aaaccgctctccaagcgcgacgatgccgcccgcttctctctccgggcgctccgcgacgcc
ggcttcgagccgatggcgctgaactctctcctcgcccgcctcggcacgccggatgcggtc
gagccctgcctctcgctcgacgagcttgccgcccgcttcgacatttcgcgcctcggccgc
gccgacatccgcttcgatccggcggacctcgccaaggtcaacaccgcctgcctccacctc
atgtcctatgaagaggcgaagccccgcctcgcggcgctgggctgcgatctcggcgaggcc
ttctgggaggcgataaagccgaacctcatcctcttctccgatgccgccgattgggcccgc
gtggtcgagggcccggtcgaacccgtcatcgaaaacccggacttcgccgccgccgccgcc
gccgctctcccgcccgagccctgggatgagagcacctgggccctctggaccgatgccgtg
aaacaggcgacaggcgccaagggcaaggccctcttcatgcccctccgcctcgccctcaca
ggtctcacgcatggaccggagctgaaaaacctgctacctctcatcggacgcgagcgggcc
tctgcccggcttggcgggctaacccgttga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PLA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (17)

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