KEGG   Parvibaculum lavamentivorans: Plav_1822
Entry
Plav_1822         CDS       T00580                                 
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pla  Parvibaculum lavamentivorans
Pathway
pla03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Plav_1822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pla03400]
    Plav_1822
Enzymes [BR:pla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Plav_1822
DNA repair and recombination proteins [BR:pla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Plav_1822
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Plav_1822
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Plav_1822
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: ABS63439
UniProt: A7HU56
Position
complement(1975746..1977152)
AA seq 468 aa
MSFVFFDTETTGLRHGFDQIVHFAAIRTDADLNEIDRFEAHSRLLPHVVPHPFALYTNGL
SIGRLTDDGLPSHYVMVQTIRRKLLSWSPSIFVGYNSIRFDEEMLRQAFFQTLHPAYLTS
NHGNCRADALGLMTAAAALSPSCLLVPFGATGRPTFRLEQLASANGIEHTRAHDAMADVL
ATLGLCRCVYERSSELWQRFVRFSKKATVADFVDSEDAFILTEFFSNEAYHAPVVCLGRD
PEQPNGRLCLRLDGDVGRFYTMSDEDLRVELARKPSPIRRFRINAAPTLTALYDARDQML
NGIDLDEVETRARRVKDDPTFCAHLISAYASIRGPHAPSRHVEEQIYDRFPGPDDEARME
RFHKVGWREVLSIVQSFEDERLRCFGLRLVYFEHRSVLPEEIRLRVERELTDRLVEEESG
GLTLRRALQETDALLGSDYTDTNGILADYRAYLVDRITRVSNFRHSIS
NT seq 1407 nt   +upstreamnt  +downstreamnt
gtgagtttcgtcttcttcgatacagagacaaccggcctgaggcacggcttcgatcagatc
gttcattttgctgccattcggaccgacgccgatctcaatgagatcgaccgatttgaagcg
cattctcgacttctcccacacgtggtgcctcacccctttgccctgtacacaaacggtctt
tctatcgggaggcttaccgatgatgggcttccgtcacattatgtcatggtccaaaccatc
cgacgaaagctgttgtcatggtctccatcgatcttcgttggatacaactcgattcgtttt
gacgaagaaatgttgagacaagcgttctttcagacactccatccggcctacctcacaagc
aatcatggcaattgccgtgctgatgccctggggctgatgacagctgcagcggcgctttct
ccaagctgcttgctggttccgtttggagcaacgggccgcccgacctttcgactggagcaa
ttggcgtcagcgaacggtatcgaacataccagagctcatgacgcgatggccgatgtccta
gccacgcttggactatgtcgctgcgtgtacgagcgctcatcagagctctggcagcgtttc
gtgcgattttcgaagaaagcgacagtcgctgatttcgttgacagcgaggatgcgttcatt
ctcacagaattttttagcaatgaagcttatcatgcaccggtcgtctgcttgggcagagat
cctgaacaacccaacggtcgtctatgcttgaggctagatggcgacgttggtcgtttctac
acgatgtcagatgaggatttgcgggtggagttggctcggaagcctagccccatacgacgg
tttcgaattaatgccgctccgactctgacagcgctctacgacgcgcgggatcagatgctg
aatggtatcgatttagatgaggtggaaactcgagctcgtcgagtgaaagacgatccaacg
ttctgcgcccatcttatttcggcctacgcctcaatacgcggaccacatgcgccgtcccga
catgtcgaagagcaaatttatgacaggtttccaggaccggacgacgaagctcgcatggaa
agattccacaaggtcggctggcgagaagtgttgtccatcgtccagagctttgaggacgag
cgcctccgatgcttcgggctccgtcttgtctatttcgaacatcgttctgtcttgccggaa
gagatacgcctccgtgtggagcgcgaactgacagaccgacttgttgaggaagaaagcggt
gggttgacacttcggcgggcactccaagagacagacgctcttctgggtagcgactacacc
gacacgaacggaattcttgctgactacagagcatacctcgtcgatcgaattacacgcgtg
tccaattttcggcacagcatttcgtga

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