KEGG T00580: Plav

Parvibaculum lavamentivorans: Plav_1937

Entry

Plav_1937 CDS T00580

Definition

glycoside hydrolase

Orthology

K07406

alpha-galactosidase [EC:3.2.1.22]

Organism

pla Parvibaculum lavamentivorans

Pathway

pla00052	Galactose metabolism
pla00561	Glycerolipid metabolism
pla00600	Sphingolipid metabolism

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:pla00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:pla00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:pla00600]

SSDB

Motif

Pfam:

Glyco_hydro_4C Glyco_hydro_4 Ldh_1_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2110780..2112093)

AA seq 437 aa
MTKVCMIGAGSTVFMKNLVGDILLNEMFADCHIALHDIDEARLKTSAIVAGKIADALSVS
PEITATTDRREALAGADFVIVMIQVAGYKPGTVVDFEIPKKHGLRQTIADTLGVGGIMRG
LRTVPVLLDIANDMRELCPRALMLQYVNPMAINCWALNRLAPDIAHVGLCHSVQGTAYEL
SKDLDVDYKSLRYQCAGINHMAFYTKFERELPDGTREDLYPKLKEIAARGEEPGWNKVRY
EMLRRTGYFVTESSEHFAEYVPWFIKRDRPDLIERFNIPLDEYIRRCEEQIAAWDAQERE
LVSANRLEVKFSGEYGAKIMRAVVSGKPTVINGNVANNGLIDNLPAGACVEVPCLVDANG
VTPTRVGALPPQLAAMMQTNINVQSLTMEAIATGKREHIYHAAMMDPHTAAELSLDQIWA
LVDDLIEAHGDWLPAYR

NT seq 1314 nt +upstreamnt +downstreamnt
atgaccaaagtctgcatgatcggcgcgggcagcactgttttcatgaaaaatctggtgggc
gacatcctgctgaacgagatgttcgcggattgccacatcgcgctgcacgacatcgatgag
gcacggctgaaaacttctgccatcgtggcgggaaagatcgccgatgcgctttcggtttca
cccgagatcaccgcgacgacggaccggcgcgaagctcttgcgggcgccgacttcgtgatc
gtcatgatccaggtcgcgggctacaagccgggcacggttgtcgattttgaaattccgaaa
aagcatggcctgcggcagaccatcgccgacacgctgggcgtgggcggaatcatgcgcgga
ctgcggaccgtgcccgtgctgctcgatatcgcaaacgatatgcgcgagctctgccccagg
gcgctcatgttgcaatatgtaaacccgatggcgatcaactgctgggcgctgaaccggctg
gcgcccgacatcgcccatgtcggcctctgccactcggtgcagggtacggcttacgaactc
tccaaggatctcgatgtcgactacaagtcgctgcgctatcaatgcgccggcatcaaccac
atggcgttctatacgaaattcgaacgcgaactgccggacggcacgcgcgaggatctctac
ccgaaactgaaagagattgcggcgcggggcgaggaaccgggctggaacaaggtacgctat
gaaatgctccgccggactggttatttcgtaaccgaatcgagcgaacacttcgccgaatat
gtgccgtggttcatcaagcgcgacaggccggacctgatcgagagattcaacattccgctc
gacgaatatatccgccgctgcgaggagcagatcgcggcatgggacgcgcaggagcgcgaa
ctcgtttcggcgaaccggctggaggtgaagttctccggcgaatatggtgcgaaaatcatg
cgcgcggtcgtgtcgggcaagcccaccgtcatcaacggcaatgtcgccaataacggcctc
atcgacaacctgccggcgggggcctgcgtggaggtgccttgcctcgtcgatgcgaacggc
gtgacgccgacgcgggtgggagccctgccgccgcagctcgcggcgatgatgcagaccaat
atcaacgtgcaatcgctgacgatggaagccatagccaccggcaagcgcgaacatatctac
catgccgccatgatggacccgcacacggcggcggagctttcgctcgaccagatatgggcg
ctcgtcgacgacctgatcgaggcacatggcgactggttgcccgcctaccgctag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PLA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

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