KEGG   Parvibaculum lavamentivorans: Plav_3580
Entry
Plav_3580         CDS       T00580                                 
Name
(GenBank) ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
pla  Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:pla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pla03016]
    Plav_3580
Enzymes [BR:pla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     Plav_3580
Transfer RNA biogenesis [BR:pla03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Plav_3580
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF6629
Other DBs
NCBI-ProteinID: ABS65178
UniProt: A7HZ45
Position
3827982..3828698
AA seq 238 aa
MRPSGRQPQEMRTVSFEPGVAKHAEGSCLVRFGDTHVLCTASLEERVPPFLKGGGQGWVT
AEYGMLPRSTHERMRREAAQGKQSGRTQEIQRLVGRSLRSVVDLKALGERQISVDCDVLQ
ADGGTRTASITGAWVALHQCIEWMRARSMISAPVLKDHVAAISCGIYQGVPVVDLDYAED
STADTDANFVITGKGGICEIQGTAEGEPFSDEEFLSLLALAKTSIADLVRRQKEAVSA
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcgcccttccggacgccagccgcaggaaatgcggaccgtcagcttcgagcccggcgtt
gccaaacatgccgaaggctcctgcctcgtccgcttcggcgacacccatgtgctgtgcacc
gccagccttgaagagcgtgtcccgcccttcctgaagggcggcggccagggctgggtcacg
gcggaatacggcatgctgccgcgctccacccatgagcgcatgcgccgcgaggccgcgcaa
ggcaagcaatccggccgcacccaggaaatccagcgtctcgtcggccgctcgctgcgctcg
gtggtcgatctgaaggcgcttggcgaacgccagatcagcgtcgattgcgacgtccttcag
gccgatggcggcacgcgcaccgcctcgatcaccggcgcctgggtcgcgcttcatcaatgt
atcgaatggatgcgcgcccgctcgatgatttcggcgcctgtcctgaaggatcatgtcgcg
gcaatttcctgtggcatctaccaaggcgttcccgtggtcgatctcgactatgcggaggat
tcgaccgccgacaccgacgcgaatttcgtcatcaccggcaagggcggcatctgcgagatc
cagggcacggccgaaggcgaacccttcagcgacgaggagttcctgtcgctgctggcgctg
gcgaaaacctccatcgcagatctcgtgcggcgccagaaggaagcggtatcggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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