KEGG   Parvibaculum lavamentivorans: Plav_3659Help
Entry
Plav_3659         CDS       T00580                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pla  Parvibaculum lavamentivorans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pla00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Plav_3659
Enzymes [BR:pla01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Plav_3659
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Plav_3659
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3912563..3913444
Genome map
AA seq 293 aa AA seqDB search
MPELPEVETVRRGLAPALEGRRIVHVTQRRPDLRFPLPELFAKRLTGRRVIRLERRAKYI
LVYMEPAKSGGAEDVLIMHLGMSGRFTVHGPSGSSAPGLFHLGMPGGETHDHIVFDMEDG
TRVVYADHRRFGFMDLVAEPELASSRHLAALGPEPLGNEFSALVLAERLKGRRAPIKSAL
LDQRTVAGLGNIYVCEALYRAGISPLRTAASIGPARVERLTAAIRAVLQDAIAAGGSTLR
DYAATDGELGYFQHAFAVYGREGEACSKPGCGGTVRRIVQSARSTFYCPACQR
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgccggaacttccagaagtcgagactgtgcgccgcggcctcgcccccgcgcttgaaggc
cgccgcatcgtccatgtgacgcagcgccgccccgatctgcggttcccactgccggaactt
ttcgcgaagcggctgacaggacgccgcgtgatccgcctggagcgccgcgcgaaatacatt
ctcgtctatatggaacctgcaaaatccggcggcgcggaagacgtgctcatcatgcatctc
ggcatgtccggccgcttcactgtgcatgggccaagcggcagctccgcccccggcctcttc
cacctcggcatgccgggcggcgaaacccatgaccacatcgttttcgacatggaggacggc
acgcgcgtcgtctatgcggatcatcgccgcttcggcttcatggatctggtcgccgagccg
gaactcgcctcgagccgccacctcgccgccctcggtcccgaacccctcggcaatgaattc
tcagccctcgtcctcgccgaaaggctgaagggccgccgcgcacccatcaaatcggcactg
ctcgatcagcggaccgtcgcaggcctcggcaatatctacgtctgcgaggccctctaccgc
gccggcatctcgcccctccgcaccgccgcctccataggccccgcccgcgtcgagcgcctc
accgccgccattcgcgccgtcttgcaggacgcgattgcggccggtggctccaccttgcgc
gactatgcggcgaccgatggcgaactcggctatttccagcacgccttcgccgtttatggc
cgtgaaggcgaagcctgttcaaagccgggctgtggcggtaccgtgaggcgcatcgtgcaa
tcggcgcgatcgacattctattgccccgcctgccagcgatag

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