KEGG   Pantoea ananatis LMG 5342: PANA5342_0019
Entry
PANA5342_0019     CDS       T01728                                 
Name
(GenBank) LacI family transcriptional regulator
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
plf  Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:plf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plf03000]
    PANA5342_0019
Transcription factors [BR:plf03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    PANA5342_0019
SSDB
Motif
Pfam: Peripla_BP_1 Peripla_BP_3 LacI Peripla_BP_4 HTH_23 HTH_38 HTH_28 HTH_Tnp_ISL3 Crp Sigma70_r4_2 HTH_Crp_2 HTH_3 HTH_24 HTH_36 Trp_syntA DUF4148
Other DBs
NCBI-ProteinID: CCF07412
Position
complement(19916..20899)
AA seq 327 aa
MSLKAIASVLGLSVTTVSRALNGYEDVAKQTRQRVEEEAQRRGYRPNVAARRLKTGRANA
VGLVYPMTTPALNDTHFNKILLALDQRLSQHDIDLVLLTDKPHDGQRSLIRMLRSRAVDA
IVVTHTSPHDARLLSLQQKGVSFLTLGRSDSEQNHAWFDVDNAAGSALAVKHCLALGMQR
IAWLGGNTTCTFVRDRRQGYLNAMDSVPPYATAVVAPSRRAGYQQTTDWLAQGLQPQAII
TDCSALAEGALVALQQAGRLEGDTAVALVAWDGLPVDAIIEHPVIAIRQASEQQRGEQVA
MMVMRLLEGAPLAELQVLWQPWLQFPQ
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtcacttaaagccattgcgtcagtattgggtctctccgttaccacagtgagccgggca
ctcaacggctatgaagatgtggcaaagcaaacgcggcagcgcgtggaagaagaagcgcag
cggcgcggctaccgtcccaacgttgcagcgcgacggttgaaaaccggccgtgccaatgcg
gttggcctggtttatccaatgaccactcccgctttaaacgatacgcactttaacaagata
ttactggcgctcgatcagcgtctttcccaacacgatatcgatctcgtgttgttaacagat
aaaccgcatgacgggcagcgttcactgattcgcatgctgcgcagccgggcagtggatgcc
attgttgttacgcacacgtcacctcatgacgcgcgcctgctcagcctgcagcagaaaggc
gtgagttttcttacgctgggacgcagtgattcagagcagaatcatgcctggttcgatgtt
gataacgccgcaggttcggcactggcggtaaaacactgcctggcgctgggtatgcaacgc
atcgcctggctcggaggcaatacaacctgcacctttgtgcgcgatcgtcgccagggctac
ctcaacgcaatggattccgtgccgccctatgccacggcggtggttgcgccgtcgcgccgg
gcgggctatcaacaaaccacagactggctggcacaggggctgcaacctcaggccattatc
accgattgcagcgccctggcggaaggcgcgctcgtggccttacagcaggcgggccgcctg
gagggtgatactgctgttgccttagtggcatgggatgggctaccggtcgacgccattatc
gaacatccggttatcgccattcggcaggccagcgagcagcagagaggcgagcaggttgcg
atgatggtgatgcggctgctggaaggagcaccgctggcggagttacaagtactgtggcaa
ccctggctgcaatttccccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system