KEGG   Pantoea ananatis LMG 5342: PANA5342_3903
Entry
PANA5342_3903     CDS       T01728                                 
Symbol
groL
Name
(GenBank) 60 kDa chaperonin (groEL protein)
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
plf  Pantoea ananatis LMG 5342
Pathway
plf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PANA5342_3903 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plf03019]
    PANA5342_3903 (groL)
   03110 Chaperones and folding catalysts [BR:plf03110]
    PANA5342_3903 (groL)
   03029 Mitochondrial biogenesis [BR:plf03029]
    PANA5342_3903 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plf04147]
    PANA5342_3903 (groL)
Enzymes [BR:plf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     PANA5342_3903 (groL)
Messenger RNA biogenesis [BR:plf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PANA5342_3903 (groL)
Chaperones and folding catalysts [BR:plf03110]
 Heat shock proteins
  HSP60 / Chaperonin
   PANA5342_3903 (groL)
Mitochondrial biogenesis [BR:plf03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    PANA5342_3903 (groL)
Exosome [BR:plf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PANA5342_3903 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   PANA5342_3903 (groL)
  Exosomal proteins of breast cancer cells
   PANA5342_3903 (groL)
  Exosomal proteins of colorectal cancer cells
   PANA5342_3903 (groL)
  Exosomal proteins of bladder cancer cells
   PANA5342_3903 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 Phage_GP20
Other DBs
NCBI-ProteinID: CCF11296
Position
complement(4119295..4120944)
AA seq 549 aa
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DQAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGTLIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELETPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGMELEKAALEDLGQAKRVVINKDTTTIIDGVGEETTIQGRVTQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAQLTELRGQNEDQNVGIKVALRAMESPLRQIVSNAGEEPSVVANNVKAGDGNYGYNA
QTEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAGAGGMG
GMGGMGGMM
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaattcggtaatgacgcacgcgtaaaaatgttgcgtggcgtg
aacgtactggcagatgcagtaaaagttaccctgggcccgaaaggccgtaacgtggttctg
gataaatcttttggtgcaccgaccatcactaaagatggtgtttctgttgcgcgtgaaatc
gagctggaagacaagttcgaaaacatgggcgcacagatggtgaaagaagttgcctctaaa
gcgaacgacgcggcaggcgacggtaccaccacggcaaccgtgctggcgcagtccatcatc
accgaaggcctgaaagccgttgcagcgggcatgaacccgatggatctgaagcgcggtatc
gaccaggcggtcatcgctgcggttgaagagctgaaaaaactgtctgttccttgctcagat
tccaaagctatcgctcaggtagggactatctctgctaactctgatgaaaccgtcggtacc
ctgatcgctcaggcgatggaaaaagtgggcaaagaaggcgtcatcaccgttgaagaaggc
accggcctgcaggacgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccgtacttcatcaacaagccagaaacaggtgccgttgagctggaaacccctttcatc
ctgctggctgacaagaagatttctaacatccgtgaaatgctgccagtgctggaagccgtt
gcgaaagcaggcaaaccactgctgatcatcgcggaagacgtagaaggcgaagcgctggcg
acgctggtggtgaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcaccgggc
ttcggcgaccgccgtaaagccatgctgcaggatatcgctatcctgaccggcggtaccgtg
atctctgaagagatcggtatggagctggaaaaagcagcactggaagatctgggccaggcg
aagcgtgtcgtgatcaataaagacaccaccaccatcatcgatggcgtgggtgaagaaacc
actattcagggtcgtgtcactcagattcgtcagcagattgaagaagccacctctgactac
gacaaagaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgccgttctgaaa
gtgggcgcagcaactgaagttgaaatgaaagagaaaaaagctcgcgttgaagatgccctg
cacgcaacccgtgctgcggtcgaagaaggcgtggttgcaggtggtggtgtggcgctggtt
cgcgttgcagcacagctgacagaactgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatcaccactgcgtcagatcgtttctaacgccggcgaa
gagccttctgttgtggcgaacaacgtgaaagcaggcgacggtaactacggttacaacgcg
cagactgaagaatacggcaacatgatcgacttcggtattctggacccaaccaaagtgacc
cgttctgctctgcagtacgcggcatcggttgctggcctgatgatcaccaccgaatgtatg
gtcactgacctgccgaaaggcgatgcgccagacttaggtgcaggcgctggcggtatgggt
ggcatgggcggtatgggcggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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