KEGG   Planctomyces sp. SH-PL62: VT85_08470
Entry
VT85_08470        CDS       T04401                                 
Name
(GenBank) recombinase A
  KO
K03553  recombination protein RecA
Organism
plh  Planctomyces sp. SH-PL62
Pathway
plh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VT85_08470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plh03400]
    VT85_08470
DNA repair and recombination proteins [BR:plh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VT85_08470
    RecFOR pathway proteins
     VT85_08470
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    VT85_08470
SSDB
Motif
Pfam: RecA RecA_C Rad51 ATPase ATPase_2 CobU AAA_25 AAA_24 AAA_16 AAA
Other DBs
NCBI-ProteinID: AMV37455
UniProt: A0A142YE61
Position
complement(2209816..2210904)
AA seq 362 aa
MAKRQVATEAKAASAEAKALNTTLSQIEKTFGAGSIMKLGEGSHLEVEGISTGALSLDLA
LGGKGLPRGRIIELFGPESSGKTTIALQAIANAQKIGGVAAFIDAEHALDPSWCKRIGVD
IESLLVSQPGSAEEALQIAEMLVLSNAVDIVVVDSVAALVPKAEIEGEIGDSHVGLQARL
MSQALRKLTGGVSRSKCVLVFINQIREKIGVMFGSPETTPGGRALKFYSSCRVDVRRIGP
VKDGEEITGSRVKVKIVKNKVAPPFRTCEFDMMYTSGISREGDILDMALADKLVEKSGSW
FNYGDMRLGQGREKVKEFLRENTALAEEIAAKVMASRTGQAAAALANGAPVDDDDDEPLD
EA
NT seq 1089 nt   +upstreamnt  +downstreamnt
gtggcgaagcgacaagtagcaaccgaggcgaaagcggcgtccgccgaggcgaaggcgctg
aacacgacgctcagccagatcgagaagacgttcggcgccggctcgatcatgaagctgggc
gaggggagccacctggaggtcgaagggatctccaccggcgccctctcgctcgacctggcg
ctcgggggcaagggcctgccgcgaggccggatcatcgagctgttcgggccggagtccagc
ggcaagacgacgatcgcgctgcaggcgatcgccaacgcccagaagatcggcggcgtggcg
gccttcatcgacgccgagcacgcgctggacccgtcgtggtgcaagcggatcggggtggac
atcgagtccctcctggtcagccagccggggagcgcggaagaggcgctgcagatcgccgag
atgctggtgctctccaacgccgtggacatcgtggtggtcgactcggtggcggccctggtg
ccgaaggccgagatcgagggggagatcggcgacagccacgtcggccttcaggcccggctg
atgagccaggcgttgcggaagctgaccggcggcgtctcccgctccaagtgcgtcctggtg
ttcatcaaccagatccgcgagaagatcggcgtgatgttcggcagtccggagaccaccccc
ggcggccgcgccctgaagttctacagctcgtgccgggtggacgtgaggcggatcgggccg
gtcaaggacggtgaggagatcaccggctctcgggtgaaggtcaagatcgtcaagaacaag
gtcgcgccgccgttccgcacgtgcgagttcgacatgatgtacaccagcggcatctcccgc
gagggggacatcctcgacatggcgctggccgacaagctcgtcgagaagtcgggctcgtgg
ttcaactacggcgacatgcggctgggccaggggcgtgagaaggtcaaggagttcctccgc
gagaacaccgcgctcgccgaggagatcgccgccaaggtcatggccagccgcaccggccag
gccgccgccgccctcgccaacggcgcgcccgtcgatgacgacgacgacgaaccgctcgac
gaggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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