KEGG T04401: VT85

Planctomyces sp. SH-PL62: VT85_23260

Entry

VT85_23260        CDS       T04401

Symbol

xseA

Name

(GenBank) Exodeoxyribonuclease 7 large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

plh Planctomyces sp. SH-PL62

Pathway

plh03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:plh00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    VT85_23260 (xseA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plh03400]
    VT85_23260 (xseA)
Enzymes [BR:plh01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     VT85_23260 (xseA)
DNA repair and recombination proteins [BR:plh03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     VT85_23260 (xseA)

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon

Other DBs

NCBI-ProteinID:

AMV40369

UniProt:

A0A142YMI0

Position

5853555..5854715

AA seq 386 aa
MSSFPLFQSSDNPYGVVFESVGGLTERIKETLEGEFGGVAVRGEISNLSRPRSGHLYFSL
KDQAAGIRAVMWRSDAQRLPFDLSDGLAVRLVGRLTVYSPRGEYQIIAQAIEPEGMGAQE
LAFRQLFARLSAEGLFDPDRKRPLPRFPRRIAVVTSPTGAAVRDLLQVTGRRWEGTDVLI
VPTRVQGLGVGREIAAALELAGLAPGVEVVIVARGGGSAEDLSPFNDERVVRAIVDCPVP
VVAAVGHEIDVTLADLAADRRALTPSEAGELVVPDGAEIAMHLDRLAQALRHAGSGRLRD
ARAGLDHLARGLTAALGQDLERRRHRLDRLKTSLDALNPEAVLARGYSLTLAQDGRTVVR
DPSQAPAGTLIQTVLAGGRITSRVES

NT seq 1161 nt +upstreamnt +downstreamnt
atgtcgagcttccccctgttccagtcctcggacaacccgtacggcgtggtcttcgaatcg
gtcgggggcctgaccgaacggatcaaggagaccctggaaggggagttcggcggggtggcg
gtccgtggcgagatctcgaacctctcgcggccgcgttccggtcatctctacttcagcctg
aaagaccaggcggccgggatccgcgcggtcatgtggcggagcgacgcccagcggctgccg
ttcgacctgtccgacggcctggccgtccggctcgtcggccggctgaccgtctacagcccg
cgcggggagtaccagatcatcgcccaggccatcgagcccgaggggatgggcgcgcaggag
ctggcgttccggcaactcttcgcccggctctcggccgaagggctgttcgacccggatcgg
aagcggcccctgccgcggttcccccgccgaatcgccgtggtcaccagccccaccggcgcg
gcggtgcgcgacctgctccaggtcaccggccgtcgctgggaagggaccgacgtgctgatc
gtccccacgagggtccagggcctgggggtcggccgcgagatcgccgccgccctggagttg
gccgggctcgcgcctggcgtcgaggtcgtgatcgtcgcccgagggggcggcagtgccgag
gatctgagcccgttcaacgacgaacgggtcgtgcgggccatcgtcgactgccccgtgccg
gtcgtcgccgctgtgggccatgagatcgacgtgacccttgccgacctggccgccgaccgc
cgcgccctgacccccagcgaagccggcgagctggtcgtccccgacggggccgagatcgcc
atgcacctggaccgtctcgcccaggcccttcgccacgccggttccggccgcctccgcgac
gcccgcgccgggctcgaccacctggcgcgaggcctgaccgccgccttgggacaggacctg
gaacgtcggcgacatcggctcgatcggctcaagacctcgctcgacgccctcaaccccgaa
gcggtcctcgcccggggatatagcctgaccctcgcccaggacggccggaccgtcgtccgc
gacccctcccaggcccccgccggcaccctcatccagaccgtcctcgccggcggtcggatc
acctcccgcgtcgaatcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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