KEGG   Candidatus Planktophila limnetica: PHILAsVB114_02705
Entry
PHILAsVB114_02705 CDS       T05067                                 
Name
(GenBank) tRNA-2-methylthio-N6-dimethylallyladenosine synthase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
plim  Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:plim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plim03016]
    PHILAsVB114_02705
Enzymes [BR:plim01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     PHILAsVB114_02705
Transfer RNA biogenesis [BR:plim03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    PHILAsVB114_02705
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2 B12-binding
Other DBs
NCBI-ProteinID: ASY27572
UniProt: A0A249LEP5
Position
504220..505641
AA seq 473 aa
MERTYSVETYGCQMNVHDSERIAGLLDEAGYIPVKTGEQADLVVFNTCAVRENADNKLYG
NLSFLAPIKKLNPGMQIAVGGCLAQKDQSIILKKAPYVDVVFGTHNVGSLPALLERARIE
EEAQIEIKESLEHFPSTLPARRLSAFSAWVSVSVGCNNTCTFCIVPTLRGIEKDRSEDDI
LREIHALVDQGVIEITLLGQNVNAYGVDFGDRQAFAKLLRKCGDIDGLERVRFMSPHPRD
FTDDVIEAMAQTRNVMPHLHMPLQSGSNQILQSMRRSYRTDRYLNILNNVRTAIPQASIT
TDIIVGFPGESESDFQATLDLCTEAQFAAAYTYQYSIRPGTPAATMPNQVSSEVVGQRYT
RLHEHQQKISLGVNKRAIGREMRVLVGEYEGRRDGRESRMTGKSEDFRLVHFADSSSARA
GDFVDVRITDASAHYLIADEIRTIATRGGDAHELRNREVTSTGVSLGIPTVRA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggagcgcacctattccgttgaaacctacggatgtcaaatgaatgttcacgactccgaa
cgcatcgcagggctattagatgaagccggatacatcccagttaaaactggtgagcaggct
gatctggttgtttttaatacgtgtgcggttcgagaaaatgcggataacaagttatatggc
aacctaagtttcttagctccaattaaaaagctaaaccctggaatgcagatagcagtgggc
ggttgtctggcgcagaaagatcaatcaataatccttaaaaaagcaccatatgttgatgtt
gtctttggaacacacaatgttggatcgctaccggcactacttgaacgcgcaaggattgaa
gaagaagcccaaatcgaaattaaagaatccctcgaacatttcccatcgacacttcctgcc
cgacgattatcagcattttcagcgtgggtttcagtatctgttggatgcaataacacctgc
actttttgcattgttccaacgcttcgcggaatcgaaaaagatcgtagcgaagatgacatt
ttgcgtgagattcacgcactcgtagatcaaggcgttattgaaattaccttgctaggtcaa
aacgtaaatgcatacggagttgattttggtgacaggcaagcatttgcaaaacttcttcgc
aagtgtggggatatcgatggtctagaacgggtgcgttttatgtctccgcatccacgagat
ttcacagacgatgtcattgaggcaatggcgcaaacccgcaatgtcatgccacatctacat
atgccattgcaatctggttcaaatcaaatcttgcagagcatgcgccgctcatatcgaaca
gatcgatacctaaatattttaaataatgtcagaactgcaatcccgcaggcatctattaca
accgacatcattgttggctttcctggtgaaagtgaatctgattttcaggctactttagat
ttatgcacagaggcacaatttgctgccgcctacacatatcaatattcgattcgcccaggt
acaccggcagcaacaatgccaaatcaagtttcatctgaagttgtcgggcagcgatacacg
cgtttacatgagcatcagcaaaagatttcacttggtgttaataaacgcgcaattggccgc
gagatgcgagttttggttggcgaatatgaaggtcgacgagatggcagagaatcgcgcatg
acgggtaagagtgaagattttcgtttagttcacttcgccgattcaagcagcgctcgtgcc
ggcgactttgttgatgttcgaatcactgatgcatctgctcattacttaattgcagatgaa
atacgcactattgcaacacgtggcggagatgcgcacgaactaagaaatagggaagttact
tcaacaggtgtctcacttggcattcctacagtgcgtgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system