KEGG   Purpureocillium lilacinum: VFPFJ_07179
Entry
VFPFJ_07179       CDS       T05029                                 
Name
(RefSeq) RNA polymerase II subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
plj  Purpureocillium lilacinum
Pathway
plj03020  RNA polymerase
plj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:plj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VFPFJ_07179
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPFJ_07179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plj03021]
    VFPFJ_07179
   03400 DNA repair and recombination proteins [BR:plj03400]
    VFPFJ_07179
Transcription machinery [BR:plj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     VFPFJ_07179
DNA repair and recombination proteins [BR:plj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VFPFJ_07179
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L Calycin_like DUF2460
Other DBs
NCBI-GeneID: 28889303
NCBI-ProteinID: XP_018177433
UniProt: A0A179HFC1
Position
Unknown
AA seq 368 aa
MDGMDYDPMVMDGEPEQPQVKISAADSTRVDFELSKTNLSFANSIRRIIQAEVPTIAIDL
VEVEVNSSVLADEFIAHRLGLIPLSSKGVNELNYSRDCDCEQYCEQCSVTLTLHAKCTSD
QIMKVYARDLVVDGRHASPVGSPVITDPEGLGCLIAKLREGQELKLSCIAKKGIAKEHAK
WMPTSAVGFEYDPHNKLHHLDLWYENNTDPQKEWPKSKYAEWEEPLQEGETFNFDAMPER
FYFEVEAAGTMEPDQIVQGGIRVLQQKIGALLKGLDPRKYGGEDADMDGPRSPDMNMDGG
TTPWQDQGFTTPYGGNMTAYGGGNTAYGGAPGTSYGGAGTSYGGGAGTSYGGGGSYGSTT
PYGQPSWQ
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggacggtatggactacgacccgatggtgatggacggggagccggagcagccccaggtc
aagatctcagcggccgacagcacgcgggtcgactttgagctgtccaagacgaacctctcc
ttcgccaactcgatacgtcgcatcatccaggccgaagtgccgaccatcgccatcgacctg
gtcgaggtcgaggtcaacagctccgtgctggccgacgagttcatcgcgcaccggctgggc
ctcatcccgctcagctccaagggcgtcaacgagctcaactactcgcgcgactgcgactgc
gagcagtactgcgagcagtgcagcgtcacgctcaccctgcacgccaagtgcacgagcgac
cagatcatgaaggtgtacgcgcgcgacctcgtcgtcgatggccgccacgccagccccgtc
ggcagccccgtcataaccgaccctgaggggctggggtgcctcatcgccaagctgcgcgag
ggccaggagctgaagctctcatgcatcgccaagaagggcatcgccaaggagcacgcaaag
tggatgcccacgtcggccgtcggcttcgagtacgatcctcacaataagctgcaccacctc
gacctgtggtacgagaacaacaccgatccgcagaaggaatggcccaagagcaaatacgcc
gagtgggaagagcccctgcaggagggtgagacgttcaacttcgacgccatgcctgagcga
ttctacttcgaggtggaggcagccgggaccatggagcccgatcagatcgtgcaaggagga
ataagagtcctccagcagaagattggcgccctcctcaagggcctcgacccgagaaaatac
ggtggtgaggatgccgacatggacggcccccggagtccggacatgaacatggacggcggc
accacgccctggcaggatcagggattcacaaccccgtacggcggcaacatgacggcctac
ggcgggggcaacacggcctatggcggcgccccgggcacgtcttacggaggagccggcacg
tcgtatggaggcggtgcaggcacgtcgtacggtggcggaggctcgtatgggagcaccacg
ccgtacggccagccatcgtggcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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