KEGG   Planococcus versutus: I858_002590
Entry
I858_002590       CDS       T04421                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pll  Planococcus versutus
Pathway
pll03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    I858_002590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pll03400]
    I858_002590
DNA repair and recombination proteins [BR:pll03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     I858_002590
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      I858_002590
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin UB2H P-loop_SecA AAA_22 AAA_19 TrwB_AAD_bind AAA_7 Microtub_bd UvrD-helicase AAA DUF87 DUF3071
Other DBs
NCBI-ProteinID: ANU25941
UniProt: A0A1B1RYC9
Position
1044346..1046328
AA seq 660 aa
MKQEFNLQAPYEPAGDQPQAIAEITQGIINGKRCQTLLGATGTGKTYTMSNVIQQVKKPT
LVMAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYVPQSDTFIEKDASINDEID
KLRHSATSSLFERDDVIVVASVSCIYGLGSPKEYRELVVSLRKGMEIERNQLLRKLVDVQ
YERNDISFTRGTFRVRGDVVEIFPASRDERCLRVEFFGDEIDRIREVDALTGKIIGERDH
VAIFPASHFVTREDKMVKAIENIEIELEERLKEMRAEDKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGAQPYTLIDYFPEDFLLVVDESHVTLPQVRGMFNGDQARKKV
LVEHGFRLPSAMDNRPLTFTEFEDHISQAVFVSATPGPYELEHTPEMVEQIIRPTGLLDP
TIEIRPIEGQIDDLMYEIRQRAEKNERVLVTTLTKKMSEDLTAYLKDAGIKVNYLHSEIK
TLERIEIIRELRMGVYDALVGINLLREGLDIPEVSLVTILDADKEGFLRSDRALIQTMGR
AARNSNGHVIMYADRITDSMQRAMDETTRRRTIQAEYNEENDVTPITIQKKIRDVIRATN
AAEESEEYISKAVSGKKLKKEERVKLISLLEVEMKEAAKALDFERAAELRDTVLELKAEG
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgaaacaggaatttaatcttcaagccccgtatgaacctgcaggtgatcaaccgcaggca
atcgctgaaataacacaaggcatcattaacggcaagcgttgccaaacattactaggtgct
accggtacaggtaaaacctacacgatgtcgaacgtcattcagcaagttaaaaaaccgaca
cttgttatggcccacaataaaaccttagcaggacagctttatagtgaattcaaagaattt
ttcccagataacgcggttgagtatttcgtcagttattatgattattaccagcccgaagcg
tatgttcctcaatccgacacatttattgaaaaagatgccagcattaacgatgaaattgat
aaattacgtcactcagcaacaagttcgttatttgaacgagacgatgtcattgttgtcgct
tcggtttcgtgtatatatggactcggttcaccaaaggaataccgtgagcttgttgtttca
ttgcgaaaaggaatggaaattgaacgcaatcagttgttaagaaaattagtagatgtgcaa
tacgaacgcaatgatattagttttactcggggtacattccgcgtacgtggagatgttgtt
gaaattttccctgcttcacgcgatgaaagatgtttacgtgttgaattttttggcgatgaa
atagaccggattcgtgaagtagatgcgttgactggcaaaattataggggaacgcgatcac
gtcgctattttccctgcatctcactttgttacgcgcgaagataaaatggtgaaagctatt
gaaaatattgaaatcgaattagaagaacggcttaaagaaatgcgtgcagaagacaaatta
ttagaagcgcagcgacttgaacagcgaacccgttacgacttagaaatgatgcgagaaatg
ggattttgttcggggatcgagaactattcgcgtcatttaacattacgtcctgcaggcgca
caaccttatacattaattgattattttccagaagattttttgttagtcgtggatgaaagt
catgtgacattgccacaagtgcgcggcatgtttaatggtgaccaagcacgtaaaaaagta
ttagttgaacatggttttcgcttgccttctgcaatggacaaccggccattaacgtttacc
gaatttgaagatcatattagccaagctgtttttgtatcagctacaccaggtccatatgaa
ttggaacatacgccagaaatggtcgaacaaattattcgtccaacaggcttattagatcca
acgattgaaattcgaccgattgaagggcaaattgatgatttgatgtacgaaattcgtcaa
cgtgcagagaaaaatgaacgtgtactcgtgaccacattgactaagaagatgtcggaagat
ttaacggcttatttaaaagatgccggcatcaaagtaaactatttgcattctgaaattaaa
acactagaacggattgaaattatccgtgaattgcgtatgggtgtttatgatgcgcttgtc
ggcattaacttattgcgtgaaggactggatattcctgaagtttcattagtaaccatctta
gatgcagataaagaaggcttcttgcgttctgaccgcgcacttattcaaacaatgggacgc
gcagcaagaaactcaaatggccacgttattatgtatgcagaccggataacagactcgatg
caacgtgcaatggacgaaaccacacgtcgacgtaccatccaagctgaatacaatgaagaa
aatgacgtaacgccaattaccatacaaaagaaaatccgtgatgtgattcgtgcaacaaat
gctgcggaagaatcagaagaatacatttcaaaagcagtatcgggcaaaaaactcaaaaaa
gaagagcgcgtgaagctaatcagtttactggaagtagaaatgaaagaagcagcaaaagca
ctcgattttgaacgtgctgcagaactgcgtgacacagttcttgaattgaaggcggaagga
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system