KEGG   Planctopirus limnophila: Plim_1338
Entry
Plim_1338         CDS       T01225                                 
Name
(GenBank) arginyl-tRNA synthetase
  KO
K01887  arginyl-tRNA synthetase [EC:6.1.1.19]
Organism
plm  Planctopirus limnophila
Pathway
plm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:plm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Plim_1338
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:plm01007]
    Plim_1338
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plm03016]
    Plim_1338
   03029 Mitochondrial biogenesis [BR:plm03029]
    Plim_1338
Enzymes [BR:plm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.19  arginine---tRNA ligase
     Plim_1338
Amino acid related enzymes [BR:plm01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   Plim_1338
Transfer RNA biogenesis [BR:plm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Plim_1338
 Prokaryotic type
   Other AARSs
    Plim_1338
Mitochondrial biogenesis [BR:plm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Plim_1338
SSDB
Motif
Pfam: tRNA-synt_1d DALR_1 Arg_tRNA_synt_N Phage_GP20 ApoLp-III SesA ATG16 GARP OHCU_decarbox Seryl_tRNA_N I_LWEQ LppC Syntaxin-6_N Uds1 ABC_tran_CTD FapA
Other DBs
NCBI-ProteinID: ADG67172
UniProt: D5SVA2
Position
complement(1706682..1708664)
AA seq 660 aa
MNLLQLLRQRLRDALVPLTPEPENFVDMLRPAGDTRFGDFQANCAMPMQKSVGKPAREIA
EQIVQGLKIDDICEPATVAGPGFINLKLKESWLEQAATECAHDVQLGLEPASPSRRYIVD
FSSPNVAKPMHVGHLRSTVIGHALYKVLKKLGHSVQSDNHIGDWGTQFGMIIFGYKNFRH
EKAFEAAPVAELARLYRLVNQLSDYHALKSTFSEIEARVPTATKSLAEAQEQLTYAAKSG
VKKSPELQQQVKKAEAELKEATEALESATKKITAVESDPELLEIAAKHPRIAEEARLETA
KLHAGDPENLALWNQFLPDCLKALEGLYARFDLKFDMTLGESWYNPMLPGVLERLEKARL
LTTSQGAQCVFIEGYEAPFIVRKSDGAFTYATTDLATIEYRVDSLQADAILYVVDSRQSE
HFDMLFATARKLGYSNVELTHVKFGTILGEDKRPFKTRSGDTVGLESLLDEAVVRARQIV
NAGDDGKPTGAELDDTTRQAIAEIVGIGGIIYADLHHSRESDYTFSFEKMLATRGDTATY
MQYAYARTHGIFRKGGIDIEQLRKGKHPLRLTQPYERMLALQLVRFGEALHDVAAEYRPN
VLTQYLFETANRFSTFFDECPVLKETDDSIRNSRLLLCDWTARVMKEGLGLLGIRVAEKM
NT seq 1983 nt   +upstreamnt  +downstreamnt
gtgaatctgctccaactcctccgacagcgacttcgcgatgctctggttccattaacacct
gagcctgaaaattttgtcgatatgctccggccagccggagacacccgctttggcgacttc
caggccaactgcgcgatgccgatgcagaagtcggtcgggaaacccgcgcgcgaaattgcc
gagcagatcgtgcaggggttgaagatcgatgacatctgcgaacctgccaccgttgccggg
cccgggtttatcaatctgaaattgaaagagtcgtggctcgaacaggcagccacagaatgc
gcccatgatgtgcagttaggcctcgagccggcgtcaccttcacgacggtacattgtcgat
ttttcttcgccgaacgtggcgaaacccatgcatgtcggccacctgcgtagcacagtcatt
ggccacgctctttacaaagtcctgaaaaagctggggcattccgtccagagtgataatcac
attggagactggggcactcagttcggcatgatcattttcgggtacaagaacttccgtcat
gaaaaggcgtttgaggccgcccccgtagcggaactcgcaaggctgtatcgactggtcaat
caactttccgattatcacgccctgaaatcgactttcagcgagatcgaagcccgagttccc
acagcgacaaaaagtctggcagaagcccaggaacaattgacgtatgccgcgaaatcggga
gtcaaaaaatctccggaacttcagcagcaggtaaaaaaagcggaagctgaactcaaagaa
gcaacagaggcactggagagtgccaccaaaaaaatcacggctgtcgagagtgatcctgaa
ctcctggagattgctgcaaaacatccccgcattgctgaagaagcccgattagaaacggcg
aagctgcatgccggagatcccgagaatctggctctctggaaccagttcctgcccgattgc
ctcaaggctctcgaaggactctacgctcgatttgatctgaagtttgacatgacactcggt
gagagctggtacaacccgatgctccccggagtgctcgagcgactcgaaaaagccagactg
ctgacaaccagtcagggtgcgcagtgtgtgttcattgaaggatacgaagctccgttcatt
gttcgcaaaagcgacggcgccttcacgtatgccacaaccgatctcgccaccatcgagtat
cgtgtggattctttgcaggccgatgccattctctacgtggtcgatagccgccagagcgag
catttcgacatgctctttgcgacagcacgcaaactaggctacagcaatgtcgagctgacg
catgtcaagtttggcaccatcctcggtgaagacaagcggccattcaaaacgagatctggc
gacactgttggcctcgaaagcctgctcgatgaagcggttgtgcgggctcgacagattgtc
aatgccggtgatgatggcaagccgacaggtgctgaactcgatgataccacccggcaggcg
attgccgaaatcgtgggcattggtgggatcatttacgccgatctgcaccacagccgcgag
agcgattacacgttcagctttgaaaaaatgctcgccaccaggggagacactgccacctac
atgcagtacgcctatgcgcgaactcatggcatctttcgcaagggtggcatcgacatcgaa
cagttgcgaaaagggaaacatccccttcgattgacgcagccatacgaacgcatgctcgct
ttacagctggttcgattcggtgaagcccttcacgacgtggctgccgaatatcgacccaat
gttctcacgcagtatctgttcgaaaccgccaacagattcagcacgttcttcgacgaatgc
ccggttctcaaagagaccgatgactcgatccgcaatagccggttgctgttatgcgactgg
acagcccgagtcatgaaggaagggcttggtctactgggaatccgcgttgccgaaaagatg
tag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (49)   

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