KEGG   Planctopirus limnophila: Plim_2626
Entry
Plim_2626         CDS       T01225                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
plm  Planctopirus limnophila
Pathway
plm03030  DNA replication
plm03430  Mismatch repair
plm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Plim_2626
   03430 Mismatch repair
    Plim_2626
   03440 Homologous recombination
    Plim_2626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plm03032]
    Plim_2626
   03400 DNA repair and recombination proteins [BR:plm03400]
    Plim_2626
   03029 Mitochondrial biogenesis [BR:plm03029]
    Plim_2626
DNA replication proteins [BR:plm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Plim_2626
DNA repair and recombination proteins [BR:plm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Plim_2626
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Plim_2626
Mitochondrial biogenesis [BR:plm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Plim_2626
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: ADG68450
UniProt: D5SQI8
Position
complement(3403625..3404155)
AA seq 176 aa
MSGSPIMASFNRVILMGNVTRDPQVRYTTGGMAVTELGLAVNRQWYDKASNQKKEEVTYV
DVTLWGRQAEVAGEYLAKGRPVFIEGRLQLDTWDDKETGQKRSKMRVVGETLQLLGSRDG
GSAGGRGESSSRGDSGSFEGGRGGRGSSRDGGQPAPSESMGSDYGDFGGGDDDVPF
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtcggggtcgccaatcatggccagtttcaaccgtgtcattctgatgggtaacgtgact
cgcgatcctcaggtgagatataccaccggcgggatggcagtcactgaactggggctggcc
gtgaacaggcagtggtacgataaagcgtcgaaccagaaaaaagaggaagtcacttatgtt
gacgtaactctctgggggcgacaggccgaagttgctggtgagtatctggccaaggggcga
cctgtcttcattgaaggtcgtttgcaactggatacctgggacgataaagagaccgggcag
aagcgatccaagatgcgagtggtgggtgaaactctccagttgctgggttctcgtgatggc
ggatctgctggtgggcgaggagaatcctcatcccggggagattctggctcttttgagggt
ggtcgcggtggacgtggttcctcacgggatggcggacagcctgcaccttctgaatcgatg
ggcagtgattacggtgattttggcggtggtgatgacgacgtgcctttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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