KEGG   Papilio machaon (common yellow swallowtail): 106716421
Entry
106716421         CDS       T05138                                 
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5-like
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
pmac  Papilio machaon (common yellow swallowtail)
Pathway
pmac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106716421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmac03019]
    106716421
   03016 Transfer RNA biogenesis [BR:pmac03016]
    106716421
Enzymes [BR:pmac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     106716421
Messenger RNA biogenesis [BR:pmac03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     106716421
Transfer RNA biogenesis [BR:pmac03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    106716421
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 PAP_NTPase Polbeta
Other DBs
NCBI-GeneID: 106716421
NCBI-ProteinID: XP_014365425
Position
Unknown
AA seq 502 aa
MCDVWCVCVCCRLHEEIEHFYMYMSPTETEHLVRSTVVTRIRSAILALWPQARVEVFGSF
RTGLYLPTSDIDLVVIGQWEKLPLWTLERELVAQDIAEKETIKVLEKATVPIVKMTDKYS
DVKVDISFNMSSGVKSAELIKQFKEKYPVLSRLVMVLKQFLLQRDLNEVFTGGISSYSLI
LMCISFLQLHPRPERLRQPHNLGVLLIEFFELYGRKFNYVKTAIRVKNGGSYVSKDEIQK
EMNDGHRPSLLCIEDPLTPGNDIGRSSYGALQVKQAFDYGYIILQQAVGAHVMCAGRGAA
GARHSALGRVLRVTDHVLQYRRWVRDTFQPYFFPRAQLLPPRPPDIEPDRDRDPEPEPAL
ALALAHDTEHELDQEPSDSDQEWSDSLGGGAMGVGGGAGGARSSPPPLSALQCSSPTPRR
VSAHQSLIIHHITSNSDFNNIPSGVMQQRYANANVNSNANASSGGGGGGAEGKGRSRTFT
GKQRRYYAAAPDSDFTIGSFPQ
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgtgtgatgtgtggtgtgtgtgtgtgtgttgcaggctgcacgaggagatcgagcacttc
tacatgtacatgtcgccgacggagacggagcacctggtccgcagcacggtcgtcacgcgt
atacgcagcgccatcctcgcgctgtggccacaggcgcgcgtcgaggtgttcggctccttc
cgcaccggcctctacctgcccaccagcgacatcgacctcgttgtcatcggtcagtgggag
aagctgccgctgtggacgttggagcgcgagctggtggcgcaggacatcgccgagaaggag
accatcaaggtgctggagaaggctaccgttcccatcgtcaagatgaccgacaagtactcc
gacgtcaaggtagacatctcgttcaacatgagcagcggcgtcaagagcgcagagttaatc
aaacagtttaaggaaaagtacccggtcttgtctcgcctggtgatggtgctgaagcagttc
ttgctgcagcgggacctaaacgaggtgttcacgggcggaatctcctcctactccctcatc
ctgatgtgcatcagcttcctgcagctgcacccgcggcccgagcgcctgcgtcagccccac
aacctcggcgtgctgctcatcgagttcttcgagctctacggcaggaagttcaactacgtc
aagaccgccatccgcgtcaagaacggcggctcctacgtctccaaggatgaaatacagaag
gagatgaacgacgggcaccggccttcgctgctgtgcatcgaggacccgctgacgccgggc
aacgacatcggccgctccagctacggcgcgctgcaggtcaagcaggcgttcgactacggc
tacataatcctgcagcaggcggtgggcgcgcacgtgatgtgtgcggggcgcggcgcggcg
ggcgcgcggcacagcgcgctcggccgcgtgctgcgcgtcaccgaccacgtgctgcagtac
cggcgctgggtgcgcgacaccttccagccgtacttcttcccccgcgcccagctgctgccg
ccgcgtccgcccgacatcgagcccgaccgcgaccgcgaccccgagcccgagcccgcactc
gcgctcgcgctcgcacacgacaccgagcacgagctcgaccaggagcccagcgacagcgac
caggagtggtcggacagcttagggggcggcgcaatgggcgtggggggcggggctggggga
gcgcgcagctcaccaccgccgctgtcggcgctgcagtgttcctcgcccacgccgcgccgc
gtctccgcgcaccagagtctcatcatccaccacatcaccagcaactcggacttcaacaac
atcccctccggagtcatgcagcagcgctacgccaacgccaacgtcaactctaacgccaac
gcgagctcgggcggtggtgggggcggagccgagggcaagggccggtcgcggacgttcacc
ggcaagcagcggcgctactacgcggccgccccggacagtgactttactataggatcattt
ccacagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system