KEGG   Parus major (Great Tit): 107200192
Entry
107200192         CDS       T04864                                 
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03430  Mismatch repair
pmaj03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    107200192 (MLH1)
   03460 Fanconi anemia pathway
    107200192 (MLH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmaj03400]
    107200192 (MLH1)
DNA repair and recombination proteins [BR:pmaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     107200192 (MLH1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 107200192
NCBI-ProteinID: XP_015473806
Ensembl: ENSPMJG00000011852
Position
2:complement(47357939..47375483)
AA seq 744 aa
MAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRY
AIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVDCEDANLAFKMK
GYITNANYSVKKCIFLLFINHRLVESAAMRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSSEVVAAN
SSVVTKGTSDKVYAHQMVRTDSREQKLDAFLQPVNNPLSAGPTEVTTEVNAGPPEGADRP
QDAEMEEVSDLVEMADVQEDTGGPSKSGCLSPETVLSRKRPREHMDVELEKDDTRKDMTA
ACTPRRRIINLTSVLTLQEEISNQAHAKLQEMLHEHSFVGCVSPQWALAQYQTKLYLLNT
TKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGLAEYIV
EFLKKKTEMLKDYFSLEIDEEGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEEKEC
FESLSKELAMFYSIRKQYIIEESNPTNSQNEDSDSGSITWKWTVEHVLYKAFRTHLLPPK
HFAEDGNILQLANLPDLYKVFERC
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggccggcgtcatccggcggctggatgaagccgtggtgaaccgcatcgccgccggcgag
gtcatccagaggccggccaacgccatcaaggagatgatcgagaactgtttggatgctaaa
tctacgagtatccaggtagtagttaaagaaggtggtctgaagttcatccaggttcaagat
aacggctgtggtatcagaaaagaagatctggacattgtatgtgagagatttactacgagt
aaactgcaaaaatttgaagacttggctagtatttctacatatggttttaggggtgaggcc
ttggctagcatcagtcatgttgcccatgttacagtaacaactaaaacagctgatgcaaag
tgtgcattcagagctacttacagtgatggaaaaatcaaagcccctccaaagccctgtgct
ggaaaccaaggaactcagatcacggttgaagatctcttttacaatgtaaatacaaggagg
aaggctctaaagaatccaaatgaagaatatgcaaaaatactagaagttgttagcaggtat
gccatccataactcaggcatcagcttttcagttaaaaagcaaggtgacacggtgtcagat
gttagaaccttatccaacgcctcaacagtggacaacattagggccatcttcggaaatgct
gttagcagggaactcatagaagtggactgtgaagatgcaaatctggcctttaaaatgaaa
ggttacatcacaaatgcaaactactctgtgaagaaatgtatatttttactcttcataaac
catcggttggtagagtcagctgctatgcgcaaagccatagaaactgtgtacgctgcttat
ttgccaaaaagcacgcacccattcctatacttaagcctggaaatagccccccagaatgta
gatgtgaatgtgcatcctacaaaacacgaggtccattttcttcatgaagacagtattctg
gagcgtgtgcaacagcatgtagagagcaagttattgggctctaattcctcaaggatgtac
ttcactcagacattgcttccaggggctgactgctcttccagtgaggttgtagcagcaaac
tcttctgtggttaccaagggaaccagcgataaagtttatgcgcatcagatggtccgcact
gattcccgagagcagaaattggatgcttttcttcagccagtgaacaaccccctaagtgca
ggcccaactgaagtgacaacagaggttaatgcaggacctccagaaggtgcagacaggccc
caggatgctgaaatggaagaagtcagtgacctggttgaaatggctgatgttcaggaggat
acaggggggccgagcaagagtggatgcttgtctcctgagactgtgctttctcggaagaga
ccacgggaacacatggacgtggaattggagaaagatgataccagaaaggatatgactgct
gcctgcacccctagaagaagaattatcaacttgaccagtgtgttgactctccaggaggaa
attagtaaccaggcacatgcaaaacttcaggagatgctacatgagcactcatttgttggt
tgtgtcagtcctcagtgggctctggcccagtaccagacaaagctgtaccttctcaataca
acaaaactcagccaagaactcttctaccagatacttatttatgactttgcaaactttgga
gtcttaaggttgtctgagccggctcctttatatgagctttcaatgcttgctttagaggat
cctgaaagtggctggacagaagaagatggcccaaaagaagggcttgctgaatacattgta
gagtttttgaaaaagaagactgaaatgttgaaagattatttctctcttgaaattgatgag
gaaggaaatctaactgggttaccacttctgatagacaactatgtcccaccattggaagga
ctgcctatgtttatcctgcgcttggccacagaggtaaactgggatgaagaaaaggagtgt
tttgaaagcttgagtaaagaactagccatgttctactccatcagaaagcagtatataata
gaggaatctaacccaacaaactctcagaatgaagattctgactctgggtcaataacatgg
aagtggactgtggaacatgtgctttacaaagcttttaggactcatcttttacctcctaaa
cactttgcagaagatggcaacattttgcagcttgctaacctgcctgacctgtataaagtt
tttgaaagatgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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