KEGG   Parus major (Great Tit): 107201533
Entry
107201533         CDS       T04864                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03013  Nucleocytoplasmic transport
pmaj03015  mRNA surveillance pathway
pmaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107201533 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    107201533 (EIF4A3)
   03015 mRNA surveillance pathway
    107201533 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107201533 (EIF4A3)
   03041 Spliceosome [BR:pmaj03041]
    107201533 (EIF4A3)
   03009 Ribosome biogenesis [BR:pmaj03009]
    107201533 (EIF4A3)
   03012 Translation factors [BR:pmaj03012]
    107201533 (EIF4A3)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107201533 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     107201533 (EIF4A3)
Spliceosome [BR:pmaj03041]
 Complex C
  Other components
   EJC/TREX
    107201533 (EIF4A3)
Ribosome biogenesis [BR:pmaj03009]
 Eukaryotic type
  90S particles
   Helicases
    107201533 (EIF4A3)
Translation factors [BR:pmaj03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    107201533 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 TniB Flavi_DEAD
Other DBs
NCBI-GeneID: 107201533
NCBI-ProteinID: XP_015476393
Ensembl: ENSPMJG00000003192
Position
3:10866669..10873288
AA seq 410 aa
MAGSAGSAGGSARKRLMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggcggggtccgcggggtcggcgggcggctcggcgcggaagcgtctcatgaaggaggag
gacatgaccaaggtggagttcgagacgagcgaggaggtggacgtgacgcccaccttcgac
accatgggcctgcgggaggacctgctgcgcggcatctacgcctacgggttcgagaagccg
tcggccatccagcagagagccatcaagcagatcatcaagggcagggacgtgatcgcacag
tcacagtcgggaacagggaagacagcaacattctccatatctgtcctacaatgcctggat
atacaggttcgcgagacccaagccttgatcctggcaccaactcgggagctggctgtgcag
attcagaaggggcttctcgccctgggagactacatgaacgtgcagtgccacgcctgcatc
gggggcaccaacgtgggagaggatatccgcaaactggattacggccagcacgttgtggct
ggcactccaggccgggtgtttgatatgattcgtcgcagaagtctaagaactcgtgccatc
aaaatgctggttttggatgaagcagatgaaatgctcaataaaggcttcaaggagcagatt
tatgatgtgtacaggtacctgcctccagccacacaggtggttctgatcagcgccactttg
ccacatgaaatcttggaaatgaccaacaaattcatgacagaccccatccgcatcctggtg
aaacgtgatgagttgaccctcgaaggaatcaagcagtttttcgtggctgtggagagggaa
gagtggaagtttgacaccttgtgtgatctctacgacacgctgaccatcacccaggctgtc
atcttttgtaacaccaagagaaaggtggactggctcacagagaagatgagggaagccaac
ttcacagtttcatccatgcatggggacatgccccaaaaggagagagagtccatcatgaaa
gagttcagatctggcgcaagccgagttcttatttccacagacgtttgggctcggggcctg
gacgtgcctcaggtgtcgctgatcattaactacgacctgcccaacaacagagaactctac
atacacagaatcggccgctcgggcaggtacggccggaaaggcgtcgccatcaactttgtg
aagaacgacgacatccgcatcctgcgggacatcgagcagtactactccacccagatcgac
gagatgcccatgaacgttgctgatcttatctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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