KEGG   Parus major (Great Tit): 107210411
Entry
107210411         CDS       T04864                                 
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmaj04121]
    107210411 (PDZRN3)
Enzymes [BR:pmaj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107210411 (PDZRN3)
Ubiquitin system [BR:pmaj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    107210411 (PDZRN3)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 Sina_ZnF zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Prok-RING_4 zf-TRAF Tricorn_PDZ zf-rbx1 TRAF3_RING U-box zf-RING_6
Other DBs
NCBI-GeneID: 107210411
NCBI-ProteinID: XP_015496692
Ensembl: ENSPMJG00000005657
Position
12:complement(17155875..17285454)
AA seq 1058 aa
MGFELDRFSGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEAHMRERCEARPAGLCEQGCGLLLTHGERRAGGHGCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRAPRAKAHEPQLVDVGTQTDITFEH
IMALSKMGSPSPPVPVLDPYLLPEDHPAVHEYYDPNDYMGGIHQEMDRDELELEEVDLHR
VNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNREEA
VALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASMLQ
QKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNGDDHTTSSNTLGSQK
KLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSANPYGL
YYHNSTLEMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQYREPWMLHNS
GFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRTAE
GINCQGNEGAVAYNVSQKNLFAGSESHESSAGKCHASTKDPDLGKQLESKERKGSDGSKS
PTHGQKASGSSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCK
DLASGQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISEMK
MGRYWSKEERKQHLVKAKEQRRRREFMMQSRLECLKEQQGAEEKKEMNIIELSHKKMMKK
RNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq 3177 nt   +upstreamnt  +downstreamnt
atggggttcgagctggatcgcttcagcggggaggtggatcccgacttcaagtgtaacctg
tgcaacaaagtgctggaggacccgctgaccaccccgtgcggacacgtcttctgcgcgggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgtcaactgccagcgcatctcc
accaaggagctcaaccacgtcctgcccctcaagagccttatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtgccgctgcagcacctgggcgagcac
gccgagacctgcgacttctccccggccaagtgccgcaaccgcggctgccgccaggtgctc
aacctgcgcgatgtggaggcgcacatgcgggagcgctgcgaggcgcggcccgcggggctg
tgcgagcagggctgcgggctgctgctgacccacggcgagcgccgggccggcggccacggc
tgcctgcgggctctgcgagcgcacggagccgcgctgcaggcgcgggcggccgcgctggag
aaggcgctgaagaaggaggcgctgcgcgccggcaagagggagcagtcgctgctgtcgcgg
ctggcggcggcacagctggagctgcaggtgacggcgctgcgctaccagaagcgattcacg
cagtacagcgcccgcctggacgcgctggcccgcgcccgagcagcctcccccggcaagggt
gaagaaactaaagcactgactctggtccttcatcgggactctggatctcttggatttaat
attattggtggccggccatgcgtggacaatcaggatgggtcatcgagcgaaggaatcttt
gtgtcgaaaatagttgacactgggcctgctgctaaggaaggagggctgcaaatccacgac
aggattattgaggtgaatgggaaggatttatccaaagccacccacgagcaggcggtggaa
gcgttcaaaaccgccaaggagcccatcgtggtgcaggtgctgaggagggccccgcgcgcc
aaggcgcacgagccgcagctggtggacgtgggcacccagaccgacatcaccttcgagcac
atcatggccctcagcaagatgggctcgcccagccctcccgtccccgtgctggacccctac
ctgctgcctgaagaccatccagctgtgcatgaatactatgacccaaatgactacatggga
ggaattcatcaagaaatggaccgggatgagttggaattagaggaagtggatttacacaga
gtgaacagccaggacaagcttggcctcactgtctgttacagaacagatgatgaagatgac
atgggtatttatgtgagtgagatcgaccccaacagcatcgccgcgaaggacgggcggctc
cgagaaggggatcgcattatccagatcaatggcatcgaggtgcagaaccgagaggaagct
gtggcgcttctctccagtgaggagagcaagaatatctccttacttgtggcaagaccggaa
attcagctggatgaaggatggatggatgatgacagaaacgattttctggatgacttgcac
atggacatgttagaggaacagcaccaccaggcaatgcaatttactgccagcatgcttcag
cagaagaagcacgaggaggatggaggcaccacagacacagccactattttgtccaaccag
cacgagaaggacagcggcgtggggcgcacagatgacagcacgcgcaatgacgagagctcc
gagcaggagaacaacggggacgatcacaccacctcctccaacactctggggagccagaag
aagctgacctacagccacgacaccctgggaagcggggacatgcagttcagcaacgagtcg
ttcatctcagccgactgcaccgacgtcgacttcctcggcatccctgtggacgagtgcgag
cggttccgggagctgctggagctgaagtgccaggtgaagtctgccaacccctacggtctg
tactaccataacagcaccctggagatgagcaaaagcgaccaagagagcgtcgacagagag
ctggagatgctcaacgaggagctgcggaacatcgagctggagtgcctcaacatcgtcagg
gcgcacaaaatgcagcagctgaaggagcagtaccgggagccctggatgctgcacaacagc
ggcttccgaaactacaacacgagcatcgacgtccgcaggcacgagctctcagacatcact
gagctgcccgagaagtccgacaaggacagctcgagtgcctacaacacgggcgagagctgc
cggagcactccgctcacgctggagatctcccctgacaattccctgcgcagaactgcagaa
ggcattaactgtcaaggaaacgagggggcagtggcgtataatgtctcccagaagaatttg
tttgctggctcggagagccatgaatccagcgctggtaaatgccacgcctccactaaagat
cctgaccttggcaagcagctggagagcaaggagaggaaaggcagcgatggcagcaaaagc
ccgactcacgggcagaaagcctcgggctcctcctacgtgtccccctaccaccactctccc
tacaaacacgctcacatccctgcccacgcccagcactaccagagctacatgcagctgatc
cagcagaaatccgccgtggaatacgcacagagccagatgagcctggtgagtatgtgcaag
gacttggcctcgggccagagcgagcccaggatggagtggaaggtcaaggtcaggagcgac
gggacgcgctacatcaccaagaggccggtgagggacaggctgctgagggaacgggccata
aagatcaaggaggagcgcagtgggatgaccacggatgacgatgccatcagtgagatgaag
atgggccggtactggagcaaggaggagaggaagcagcacctggtgaaagccaaggagcag
aggaggcggcgggagttcatgatgcagagcaggttagagtgcttaaaggagcagcaaggt
gcagaggagaagaaggagatgaacatcattgaactgagccacaaaaaaatgatgaagaag
agaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacccatggaaca
aagtcaccggacggcacgcgggtgtacaattccttcctgtcagtgactactgtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (18)   
   Pfam (18)   
All databases (32)   

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