KEGG   Parus major (Great Tit): 107211884
Entry
107211884         CDS       T04864                                 
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmaj03016]
    107211884 (PUS1)
Enzymes [BR:pmaj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     107211884 (PUS1)
Transfer RNA biogenesis [BR:pmaj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    107211884 (PUS1)
 Prokaryotic type
    107211884 (PUS1)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 107211884
NCBI-ProteinID: XP_015499943
Ensembl: ENSPMJG00000013448
Position
15:5504465..5511300
AA seq 427 aa
MELSLSARGSCRSCPSHLRLFPLQVLTMAEDLIAAVASQTKRLNSSEVVQRLEENGHQNK
RLKSDADEEDAEDQNKKSPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQS
GCIPENHGEDMKKMSFQRCARTDKGVSAAGQIVSLKVRLIDDILEKINNHLPSHIRILGL
KRVTGGFNSKNKCDARTYSYMLPTFAFAHKDHEVQEELYRLDTETLERVNKLLACYKGTH
NFHNFTSQKGPRDPSAKRYIMEMYCGEPFVRQNMEFAVIKVKGQSFMMHQIRKMIGLVIA
IVKGYAAESIMERSWGEEKVDVPKAPGLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEE
KIAVFKEQYIYPTIINTEREEKSMANWLNTLPIHDFNSSAVEMQTNNKNSKKSSDIEGSD
GCGDDSD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggagctgtcgctttctgcccgaggttcgtgccgttcatgcccgtcccatctgcggttg
tttcccctgcaggttcttacaatggctgaggatttgatagcagcggttgccagccagaca
aagaggctcaacagcagcgaagtggttcaaaggctggaagaaaacgggcatcaaaacaaa
aggttgaagagcgatgcggatgaggaagatgcagaggatcagaataagaagtcacccaaa
aggaagattgtgctgttgatggcatattcagggaaaggctaccatggcatgcagagaaac
gtgggatcttcccagttcaagacaattgaagatgacctagtctctgcccttgttcagtct
ggatgcatcccagaaaaccacggggaagatatgaagaagatgtctttccagcgctgtgct
cgaacagataagggtgtgtctgcagctggacagattgtctcactgaaggtcaggctaata
gatgacatcttagaaaagatcaataatcatcttccttctcacatcagaattctgggcctg
aagagagtcaccgggggattcaactccaagaacaaatgtgacgccagaacctactcttac
atgctgccaacgtttgcctttgcccataaggaccatgaggtgcaggaagagctttatcgg
ctggacacagagacccttgaaagggtcaataaactgctggcctgctacaaagggacacac
aacttccacaacttcacatcacagaagggccccagggaccccagtgccaagcggtacatc
atggagatgtactgtggtgagcccttcgtcaggcaaaacatggagtttgcagtgatcaaa
gtgaagggtcagagtttcatgatgcaccagatcaggaagatgattgggctggtgatagca
attgtgaaaggttatgctgctgagtccatcatggaacgcagctggggagaggagaaggtc
gatgtccccaaagccccaggacttgggctggttttggagaaggtacactttgaaaaatac
aacaggcgttttgggaatgatgggctgcatgagccactggagtggacagaggaggaggag
aagattgctgttttcaaagagcagtacatctatcctaccattatcaacacagaaagggag
gagaaatccatggcaaactggcttaacacccttcccattcatgacttcaactcatctgct
gttgagatgcaaactaacaacaaaaattcaaagaagagcagcgatatcgaaggcagcgat
ggttgtggtgatgattctgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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