KEGG   Pseudomonas mandelii: OU5_4877
Entry
OU5_4877          CDS       T03626                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase B
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pman  Pseudomonas mandelii
Pathway
pman03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pman00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OU5_4877 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pman03400]
    OU5_4877 (ruvB)
Enzymes [BR:pman01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OU5_4877 (ruvB)
DNA repair and recombination proteins [BR:pman03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OU5_4877 (ruvB)
    RecFOR pathway proteins
     OU5_4877 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase TIP49 AAA_3 AAA_16 AAA_14 nSTAND3 AAA_17 RNA_helicase Rad17 AAA_2 AAA_28 AAA_18 NTPase_1 NB-ARC AAA_24 TsaE ABC_tran AAA_19 T2SSE RsgA_GTPase AAA_11
Other DBs
NCBI-ProteinID: AHZ71956
UniProt: A0A024EH68
Position
5424233..5425294
AA seq 353 aa
MIEADRLIAATPGPRDREEVQDRAIRPVSLAEYIGQPTVREQMELFIQAARGRNESLDHT
LIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRL
SPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV
QRLEFYNTADLATIVSRSANILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRA
KGHITKPIADLALNLLDVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIE
DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRLGEMPVVDEFLDAVDD
NT seq 1062 nt   +upstreamnt  +downstreamnt
gtgattgaagctgatcgtctgattgccgccacgcccggccctcgcgaccgcgaggaagtc
caggaccgggcgattcgccccgtcagcctggccgagtacattggccagccgaccgttcgc
gagcaaatggagttgttcatccaggccgcacgcgggcgtaacgagtccctggaccacacg
ctgattttcggcccgccgggtctgggtaaaaccaccctggccaacatcatcgcccaggaa
atgggcgtgtcgatcaagagcacttcgggcccggtgcttgagcgcccgggtgatctggcg
gcgctgttgaccaaccttgagccccacgacgtgctgtttatcgatgaaatccatcggctc
tcaccgatcgtcgaggaagtgctgtacccggccatggaagatttccagctcgacatcatg
attggtgaagggccggctgcgcgctcgatcaaactggatctgccgccgttcaccctggtg
ggggcgacgacgcgggccggcatgctgaccaacccgttacgcgaccgctttggcatcgtc
cagcgcctggagttctacaacaccgccgacctggcgacgattgtcagtcgttcggcgaac
atcctcggcttgccgctggacccggagggcgcctttgagatcgcccgtcgtgcccgtggc
acgccgcggatcgccaaccgtttgttgcgcagggttcgggatttcgccgaagtgcgtgcc
aagggccacatcaccaaaccgatcgccgacttggccttgaacctgctggacgtcgacgag
cgtggcttcgatcaccaggaccggcgcctgctgttgaccatgatcgagaagttcgacggt
gggccggtgggtgtggacagtctggccgcggcgatcagcgaagagcgtcacaccattgaa
gacgtgctggagccatatttgatccagcagggctacatcatgcgcacgccgcgggggcga
gtggtcactcggcacgcgtatctgcacttcggtttaaacattccgtcacgattgggcgag
atgcccgttgtagacgagttcctcgatgcggtagacgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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