KEGG   Planococcus sp. Y42: B0X71_06725
Entry
B0X71_06725       CDS       T04763                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pmar  Planococcus sp. Y42
Pathway
pmar03030  DNA replication
pmar03430  Mismatch repair
pmar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B0X71_06725
   03430 Mismatch repair
    B0X71_06725
   03440 Homologous recombination
    B0X71_06725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmar03032]
    B0X71_06725
   03400 DNA repair and recombination proteins [BR:pmar03400]
    B0X71_06725
Enzymes [BR:pmar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B0X71_06725
DNA replication proteins [BR:pmar03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B0X71_06725
DNA repair and recombination proteins [BR:pmar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B0X71_06725
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 tRNA_anti-codon PHP tRNA_anti_2 PucR HROB DUF655
Other DBs
NCBI-ProteinID: AQQ52810
UniProt: A0A1Q2KX95
Position
1306154..1309210
AA seq 1018 aa
MSIVYPHITTSADLLKSIVRVDDLFPFLTAQEASAAALVNTRLYGVLPFWEAARRAGIHP
VLGLPAALEYEDRTYPAVLYAKSDAGYRNLLKLSSALATRDREDVPDKWAAAYREGLICV
LLNDGSWLPGGQDEFIRYLRTVYGQDVYGAVMRPGGVRTEVEAGFVTLCDDHGVPVIATQ
ASRYLTKEETFAFEAASAIAQGVKLSDDERPVPPADQHVPEAEEFRSWFTDHPEWLEASA
RLMSECQVTVPTDQKLLPVFPLPESISAAQYLRSACEKGMAARGCTHPDYQKRLDYELTV
IESMGYSDYFLIVADFVKFARDSHILTGPGRGSSAGSLVAYVLAITDVDPLVHGLLFERF
LNPERVTLPDIDIDFADYRRQEVIEYVARKYGPQRTAQIITFGTLSAKAVARDVGRVFGF
PPEDLETISKMIPSKPGITLADAESGSAEFRAWITENEERKKWFQTASALEGLPRNASTH
AAGIILSPIPLVNVVPIEKGNEGIFMTQWPMNELEKTGLLKMDFLGLRNLTILERIRHLL
NRDTGHWLDYRQLPLNDEQTYQLLAAGDTTGIFQLESEGMRRALQLIQPTGFNDIVAVNA
LFRPGPMDFIPLYAKRKKGEEPVRFLHPALEPILGETYGVIVYQEQIMRIASEMAGFSLG
EADLLRRAVSKKKREILDDERAHFIKGATGKGYSQPVANDVYDLIVRFANYGFPKSHAVA
YSLISYWLAYAKAHHPAYFYAALLSGAAGNPEKVNQLLQEAKSRHIPLLPPSVQKSGSGF
RVEGGGVRFGLNAVKDVPGSAVKAILEARKTGPFDSLFHIAERISGVHFKRKSMEPLIKA
GAFDDFGVDRSVLLASLEAAAKHAELVRPSEEPGLFDPAEDIFIKPKYTKASLMPDRVKL
EFEKEVLGFYLSEHPLEQEKQKRGRNFLPVNKIRNCRNGQAVTVLAMVLDVKQIRTKKGE
AMAFLTLQDETGETRATVFPREYAAYAPSLGDQAVIEIQGTVEFWNQKPSIICKSITF
NT seq 3057 nt   +upstreamnt  +downstreamnt
ttgtcgatcgtttatccgcacattacgacatcggctgacttgctgaaaagcattgtgcgc
gttgatgatttgtttccgttcctgacagcgcaggaggcatcggcggcagcactggtcaac
acacggctatacggcgtcctgcctttttgggaagcagcccggcgtgcagggattcacccg
gtattggggctgcccgctgcacttgagtatgaagaccggacctatcccgctgtcctttat
gcaaaatcggatgccgggtacaggaacctccttaaactgtccagtgcactcgcgacacgc
gaccgggaagatgtgccggataaatgggcagcagcgtaccgggaagggctgatctgtgtc
ctgctgaatgacggaagctggctgcccggaggacaggatgagtttatccggtatttgcgg
acggtgtacggtcaagacgtatacggagcggtcatgcgtcccggcggtgtccgaactgaa
gtcgaggccgggtttgtaactctttgtgatgatcatggcgtgcccgttattgccacgcag
gccagccggtatttgacgaaagaagagacgtttgctttcgaagcggcctctgcaattgct
caaggagttaaactgtcagatgacgaacggccggttccgcctgcagaccagcatgtgcct
gaagcagaggagttccggtcctggttcactgaccaccctgaatggctggaagcaagtgcg
cgtctgatgagcgagtgccaagtcacagtgccgactgatcagaaactattgccggtgttt
ccgttgccggaaagcataagtgctgcacagtatctccggtctgcctgtgaaaagggtatg
gccgccagagggtgtacgcatcctgattatcaaaagcgcttagattatgaattgactgtg
atcgaatcgatgggctacagcgattattttctgatcgtagctgatttcgtgaagtttgcc
agggacagtcatattctgacgggtccgggacgcggatcatcagccggctcacttgttgcc
tatgtcctggccatcacggatgtcgatccgcttgtgcatggtttgctgtttgagcgtttc
ctgaatcccgaacgggtgacactgccggatatcgatatcgatttcgccgattaccgccgg
caggaagtaatcgagtatgtggcccgcaaatacgggccgcagcgtactgcccaaatcatt
acgtttggtacgttgtcagcaaaagccgttgcccgggatgtgggcagggtattcggattt
ccgcctgaggatcttgaaacgatttccaaaatgattccaagtaaaccgggcatcacgctg
gcagatgcggaatcgggatcggcagagttccgcgcatggatcacggaaaatgaagaacgg
aaaaaatggtttcagacggcaagcgcactggaaggattgccccgtaatgcatccacgcat
gctgcaggcatcattttaagtccaattccgctcgttaatgtcgttcccattgaaaagggc
aatgaaggcatttttatgacccaatggccaatgaatgagcttgagaagaccggtttgctg
aaaatggattttcttggattacgcaatctcaccattcttgagcggatccgccatttgctg
aaccgggataccgggcattggcttgattaccggcagctgccgctcaatgacgaacagact
taccaattgctggcggctggagatacgaccggtatcttccaattggaatcagaagggatg
cgccgggcacttcaattgatccagccgactggatttaatgacattgttgctgtcaacgcg
cttttccggccgggtccgatggatttcatcccgctttacgcgaagcggaaaaaaggcgaa
gaaccggtccgtttccttcatccggcacttgagccgattcttggtgaaacgtatggcgta
attgtttatcaggaacagattatgcgaatcgcttctgaaatggccggcttttcgcttggc
gaagcggatctgctccggcgcgcggtcagcaaaaagaaacgggaaatattggatgatgaa
cgggcgcatttcattaaaggcgcaacggggaagggttatagccagccggtcgcgaacgac
gtgtatgatctcattgtccgattcgctaattacgggttcccgaaaagccatgcagttgct
tatagcttgatctcatactggctggcttatgcaaaagcgcatcacccggcatacttttat
gcggccctactctccggtgccgccggtaaccccgagaaagtgaatcaattgctgcaggaa
gcgaaaagtagacacattcctctgctgccgccctccgtccaaaaaagcggatcgggtttc
cgggtagaaggcgggggcgtccgatttggtctgaatgcggtgaaggatgtgccgggttct
gcagtgaaagcgattcttgaagcacggaaaaccgggccatttgacagtctgttccatata
gcggaacggatttcgggcgtgcatttcaagcggaaatccatggagccgctgatcaaagcc
ggtgcatttgatgatttcggagtcgaccggtcagtactgctggcttcccttgaagcagcg
gcgaaacatgccgaactcgtccgtccatcagaagagccgggtctgttcgaccccgctgag
gatattttcattaagcctaaatatacaaaagcttcactcatgcccgatcgtgtaaaactg
gagtttgagaaagaagtgctcggtttctatctgtcggaacatccgctggaacaggaaaaa
cagaaacgcggccggaacttcctgccggttaataagatcaggaattgccggaacggacag
gctgtcacagtgcttgccatggtgctggacgtgaagcagatccggacgaaaaagggagaa
gcaatggcttttcttacgctgcaggacgagactggtgaaacacgcgctactgtatttcct
cgggagtacgcagcgtatgcaccgtcgctcggggaccaagcggtaattgaaattcaagga
acggtcgagttctggaatcagaagccatccatcatatgcaaatccattacattttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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