KEGG   Planococcus sp. Y42: B0X71_07300
Entry
B0X71_07300       CDS       T04763                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmar  Planococcus sp. Y42
Pathway
pmar03410  Base excision repair
pmar03430  Mismatch repair
pmar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B0X71_07300
   03430 Mismatch repair
    B0X71_07300
   03440 Homologous recombination
    B0X71_07300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmar03400]
    B0X71_07300
DNA repair and recombination proteins [BR:pmar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     B0X71_07300
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     B0X71_07300
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B0X71_07300
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AQQ52914
UniProt: A0A1Q2KXT5
Position
1430053..1432395
AA seq 780 aa
MIESKKQWQLSTPDEHKTKQLERELDIPPVLAKILVSRGMDTPEKAHAFMNIDHTSLHDP
YLLKDMDKAVTRIREAIDKQEQIIVYGDYDADGVTSTSVMMTVLRDLGADVTFMIPNRFD
HGYGPNSELFQLASDSGCTLLITVDNGVSGIEQAKLAKQLGMDLIITDHHDIGEVLPEAH
AVIHPRHPDSTYPFGELAGVGVAFKLAHALYGEAPDHLLELAAIGTVADLVPLHGENRYL
VREGISRLKTTGRAAIAALCEVAGVGAHEITEETLGFAFGPRINAIGRLQDAGPAVDLLL
SADPAEARGLAKQLDMLNKERQSIVAKITEQATAQVHARHPDGAPHVIVVAQEGWNPGVV
GIVASRLVELFYRPTIVLSLDPETGKAKGSARSIEGFHLYNELAQNRDILPHFGGHPMAA
GMTLAAADVDALRERLNRQGEAVLTDDQLIPAVEIDIPVEPAEISIETLESIRSLAPYGM
GFSRPKFYLNGVRAATIRKIGANKNHLKMELEKDGTAIDAIGFSLGHLADELTPEVKVEA
IGDLQINEWNGRKKPQLLLEDLRTTEWQLYDIRGVRQVTRWAPLIPETDQLYVVFRNETV
EAFQKLVKAPIKQADGLDEADCAAHHLVLLDLPDSEQQLQDVLLRIRPRRVYCHFFTEES
HYFGTLPDRDQFKWLFGFLKQRGRFDVRKDGETLAKHKGWSRDSLIFMLQVFFELGFVKM
NNGLTEIAETPVKRDLSEAPSYQKRQRQMELEQKLLYASYHDLKEWFNAQLSAREEKVWI
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgattgaatccaaaaaacagtggcaattgtccacacctgatgaacataaaactaaacag
ctggagcgggaactcgatattccgccggttcttgcaaaaatactcgtttcccgcggcatg
gatacgcctgaaaaagcccatgcttttatgaatatcgaccatacatcgcttcacgatccg
tatttattgaaagacatggataaagcggtcacccgcatccgcgaggcgatcgacaaacag
gaacagatcatcgtatacggcgattatgatgccgatggcgtcacgagcacatcggtcatg
atgaccgtgctccgggacctcggagcggacgtgacgttcatgatcccgaaccgcttcgat
cacggctacggtccgaacagtgaacttttccagttggcatccgacagcggctgcacgctc
ttgatcaccgtcgataacggcgtgtcgggcatcgaacaggctaagctcgccaagcagctc
ggcatggatctcatcatcaccgatcaccacgatatcggggaggtgctgccggaagcgcat
gctgtcatccacccccgccatccggactctacatacccattcggcgaactggccggcgtc
ggcgtcgccttcaaattggcgcatgccctttacggcgaagcgcctgatcatttattggaa
ctggccgcgattggcaccgtggcggacctcgtgccgctgcacggggaaaaccgctatctc
gtccgggaaggcatcagccgcctgaagacgaccggccgtgcagcgattgcggcgctttgt
gaagtggcgggcgtcggagcgcatgaaatcacggaagagacgctcggcttcgctttcggt
ccccgcatcaatgcgatcggccggctccaggatgccggtcccgcagtcgatcttctgctg
tcggcagacccggcggaagcgcgggggcttgccaagcaactcgatatgctcaataaagaa
cggcagtccattgtcgcgaaaatcacggagcaggcgacagcccaagtgcatgcgaggcat
ccggacggcgcgccgcatgtcatcgttgtcgctcaggaaggctggaatcccggtgtcgtc
ggcattgtcgcatcccggctcgtagaattgttctaccggccgacgatcgtcttgtcgctt
gacccggaaaccggaaaagcgaaagggtccgcccggagcatcgaaggctttcatctatac
aatgaactggcgcagaaccgggatatcctcccgcatttcggtggccacccgatggcggcg
ggcatgacgcttgcagccgctgacgtcgatgcgctgcgggagcggctcaaccggcaagga
gaagccgtgctgacggacgatcaattgattccggcagtggagattgatattccggtggaa
ccggctgaaatcagcattgagacgcttgaatcgattcggtcgctcgccccgtacggcatg
ggcttcagccggccgaaattttatctgaacggtgtccgggcagcgacgatccgcaaaatc
ggcgccaataagaaccatttgaaaatggaacttgaaaaagacggcacggcgatcgacgct
atcggattcagcctcggtcatttggcggatgagctgacaccggaagtgaaagtggaagcg
atcggcgatctgcagatcaacgaatggaatggccgcaaaaagccgcagctgctgctggag
gacttgcggacgaccgagtggcaattatatgacatccgtggtgtgcggcaagtgacgcgc
tgggcgccgctcattcctgaaaccgaccaactgtacgtggtgttccggaacgaaacggtg
gaagcattccagaagctcgtgaaggcgccgatcaagcaggcggacggacttgatgaggcg
gattgtgctgcccatcaccttgtgctgctcgatctgccggacagcgaacagcagctgcag
gatgtgctgctgcgcattcgtccaagaagggtgtactgccatttcttcacagaagaatcc
cattatttcggcacattgccggaccgggatcagtttaaatggctgttcggcttcctgaag
cagcggggccggttcgatgtgcggaaagacggagagacgctcgcaaagcataaaggctgg
agccgcgattcactcatttttatgctgcaggtgttttttgagctcggatttgttaaaatg
aataatggactgactgaaatcgcggaaacgcctgtcaaacgggatctttcagaagcacca
tcttatcagaaacgccagcggcagatggaacttgaacagaaactcctgtatgcgtcgtat
catgacctgaaggaatggttcaatgcccagctgtcagccagggaggaaaaagtatggatt
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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